Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MQPENPMIYITKIVILYACNLKFPVKLHGKLLNLALLVLNSLFSLNMVSTLEVYALITSGKQMLLTFLNLDVLNMFMFLLTLFPIFSWPPFTLENQHVTVFNICCFAFLLQESHKPLKQIMDLVILAVLFNVFVFLSKFIIKQEFLIIHRDKVL |
1 | 6ob6A2 | 0.04 | 0.03 | 0.73 | 0.64 | DisCoVER | | LAFSVCFIFTITIGMFPAVTVEVKS-IPVSCFLTFNIF--------------DW-LG------RS-LTA----------------MWPGKWLPSLVLARL-VFVPLLLCNIVVFEHDAWFIFFMAAFAF-SNGYLASLCMCFGPMAFFLCLGL- |
2 | 5levA | 0.08 | 0.07 | 0.88 | 1.00 | DEthreader | | LINLIVSLLGFVATVTL---IPAFRHQGVISGAVFLIILFFIPEFVAGALLAICCMIFLGKLLPTASMLLFCTNAINLLEAQLVISASIIVFNLLMIPFFFTTLGLLYHNWYPSRV--FV-GD-TFCYFAGMTFAGVGILGHF----------- |
3 | 3rauA1 | 0.13 | 0.13 | 0.99 | 0.54 | CEthreader | | ENPEAYNEELKKLELLRQNRVPRDFEGCSVLRKYLGQLHYLQSRVPMGSGQEAAVPVTSVAHEDIKYEQACILYNLGALHS-MLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHLTLNVNLMLGQAQECLLEKSMLDNRKPLPVNPTDPAVT |
4 | 2ouyA | 0.10 | 0.10 | 1.00 | 0.65 | EigenThreader | | HNWKHAVTVAHCMYAILQNNHTLFTDLERKGLLIACLCHLAALYSTSTMEQHHFSQTVSILQLAIIATDLALYFGNRKQLEEMYQTGSLNLNNQSHRDRVIGLMMTACDLKLGIQPINAVAIPCYTTLTQILTEPLLKACRDNLSQWEKVIRGE |
5 | 3jacA | 0.20 | 0.16 | 0.79 | 0.40 | HHpred | | --SQNQLWYFVKCIYFSAYQIRYPTRILGNFLTKKYN------HLNLFL-FQGFRLVPF-------LVELRAVMDWVWTDTTLSLSNW--MCVEDIYANIFIIKCSRETEKKYPQPVKYGMGGLIILFLIAIIWFMSLI--------------- |
6 | 6rohA3 | 0.06 | 0.05 | 0.86 | 0.43 | MRFsearch | | --------FLKKLLLVHGSWSAILYSFYKNTALYMTQFWYVFANAMESWTMSFYNLFFTSVYIFWGWIINGFFHSAIVFIGTILIYRYGFAHGELADHWSWGVTVYTTSVIIVLWTKFTLIAIPGSLLFWLIFFPIYASIF------------- |
7 | 6thkA1 | 0.19 | 0.17 | 0.87 | 0.66 | FFAS-3D | | -------IYLQK-------NIYYPVRSIFEQGTKEKKEINKKVS---DQVDGLLKQITQGKREATRQERVDVMSAVLDLEGYKKTFTKGPFIDKQSSLSIYEAWVKIWEKERKKYPFQQLVRDELERSLSEAVKVLRQELNKQKALKEKED--- |
8 | 5mqfT | 0.09 | 0.09 | 1.00 | 0.59 | SPARKS-K | | ENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQEVLCLEMLTLLLERPTDDSEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHDKRVQYMIEVMFAVRKDINLVSFRR |
9 | 3rkoB | 0.11 | 0.10 | 0.87 | 0.74 | CNFpred | | ------LMLLGGAVGKSAQQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKR-VLAYSTMSQIGYMFLALGVQ---AWDAAIFHLMTHAFFKALLFLASGSVILAC---------- |
10 | 4av3A | 0.06 | 0.06 | 0.94 | 1.00 | DEthreader | | PMFAGLYGCSIIAMFDRVGGGVYTGVGDVAGLGADLLESFVA-AAGIFSGILIGFWAYYKPLSVFPTFIGSAIFAALSLFSY-S-I-VGGLI-GTVLSGAMLAILTANSGGWGDTGDPLKDTVGPSLDILIKIMSVVSVIAVSIFKHVH--L-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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