>PF04148 (205 residues) MWILPLLGYLGSVVGFCFMTLAIASGLYYLSELVEEHTVMAKRFLTRLIYSIMALQLLLC VVDRFPFLPTLLGIFSHFVYLGNMRRFPFVKLTDPLFLASCVLVLLNHYVWFKHFSHHQE RAYQNMTSYYDTPDDIPSFTEIASYFGLCVWLVPFSLFVSLSASDNVLPTMGSEPSTSAA AGMVDTGNARRRGQGLVKALVDSVR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MWILPLLGYLGSVVGFCFMTLAIASGLYYLSELVEEHTVMAKRFLTRLIYSIMALQLLLCVVDRFPFLPTLLGIFSHFVYLGNMRRFPFVKLTDPLFLASCVLVLLNHYVWFKHFSHHQERAYQNMTSYYDTPDDIPSFTEIASYFGLCVWLVPFSLFVSLSASDNVLPTMGSEPSTSAAAGMVDTGNARRRGQGLVKALVDSVR | |||||||||||||||||||
1 | 4lz6A1 | 0.10 | 0.08 | 0.80 | 0.68 | DisCoVER | QSERLLRSLSIPAMIGMFVMALYNVVDTIFISYAVGIEGVAGVTIAFPIMMIMMSMAGALGGAISFGILTVILVLSVIGFISALTQGYATDY------LFPILLGSIFFFFAFAAN------------NIIR---SEGNATFAMVTMIVPAVLNILLDVLFIFGLNMGVLGAS--------------------IATVIAQPMGI- | |||||||||||||
2 | 5xtcs | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | TITLYITAPTLALTIA-LLL-WTPLPMPNPLVN---L--N--LGLLFILATSSLAVYSILWSGWGALRAVAQTISYEVTLAIILLSLLMSLLLWPLAMMWFISTLAENRFDLAEGESELVSG----------FNIEYAFALFFMAEYTNIIMMNTLTTTIFLGTTY-----MPSIPP--QT------------------------ | |||||||||||||
3 | 5aymA1 | 0.08 | 0.08 | 0.96 | 0.44 | CEthreader | LRIETQLLLGRLLTRSGDQAWDFVVPFALLVIFPGKLQVAAFYYLIVKIGTFLLTPSSGKWIDTHPWLQFFAILAGMVFFGMLDGLVRAGGRESWLLSVLFIALALSGVMASLGSQITDISVGNDLAPSLVAPEKFNSWLRRIDLATEVGAPILAGALFPLAGLFLIGLWNLVSFVPEYFLLRNVIQRSGLKIKVL--------- | |||||||||||||
4 | 6csmA | 0.09 | 0.08 | 0.91 | 0.72 | EigenThreader | YGEWSRENQFCVEKGIKYVQLVMAVVSACQVFFMVTRAIYLPTTEMARMASWLIMLGLVSN--MALVMMIAASSICTVFGITAS-----VVLDPLHVWLYCFISSIFMVVAFAIFAITIHDFQTIGS-PMSLKVVERLKLMRIVFYVSWMGDALCKNYGILLWATTWGLLNGKWDRDYVKGRNVDGTLMPEYEQD---------- | |||||||||||||
5 | 4k5yA | 0.13 | 0.11 | 0.88 | 0.32 | HHpred | -HVAAIINYLGHCISLVALLVAFVLFLRA-----RSIRCLRNIIHANLIAAFILRNATWFVVQSNVGWCRLVTAAYNYFHVTNF-------------FWM---FGEGCYLHTAIVFETIGHLIGRNSNGVIQTPGDAYDRLRAWMFICIGWGVPFPIIVAWAIGKLYYDAGKRPGVYDQGPLRASTTSETIQARKAVKATLVL-- | |||||||||||||
6 | 6kkrA | 0.12 | 0.09 | 0.80 | 0.27 | MRFsearch | --LYVVADIATSFTVLVGIFFPSVTGIMAGSNRSGDLRDAQKSIPVGTILAIITTSLVYFSSVPSPWVIVIGSFFSRLLQAIAKDIIPFLRVGEPTWALLLTALIAELGILIASLD---------------------MVAPILSMFFLMCYLFVNLACAVQTLLR------------------TPNWRPRFKYYHWALSFLGMSL | |||||||||||||
7 | 6y9bC | 0.16 | 0.11 | 0.70 | 0.82 | FFAS-3D | ---ILVINKVLPMVSITLLALVYLPGV--IAAIVQDKWMLTRKQFGLLSFFFAVLHAIYSLSYPMRRIYVSLGIVGLAILALLAREFHYIQ---SKLGIVSLLLGTIHALIF---------AWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILF---------LP------------------------------------ | |||||||||||||
8 | 6xmpA2 | 0.09 | 0.08 | 0.90 | 0.83 | SPARKS-K | TEEGLKKLGEQRRLEKLANVSAVTNIIRQGRCALVNTIQMYKILALNCLISAYSLSIIYMAGVKFGDGQATVSGLLLSVCFLSIKQRPQSGIFNVYIMGSILSQFAVHIATLVYITTEIYKLE-PREPQVDLEKEFAPSLLNTGIFIIQLVQQVSTFAVNYQGEPFRENI--------------------RSNKGMYYGLLGVTG | |||||||||||||
9 | 3rkoB | 0.12 | 0.11 | 0.92 | 0.96 | CNFpred | TWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQIKRVLAYSTMSQIGYMFLALGVQAWD-AAIFHLMTHAFFKALLFLASGSVILAC--HEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPTAGFFSKDEILAGAMANGHINLMVAG-------------VGAFMTSLYTFR | |||||||||||||
10 | 4n6hA | 0.07 | 0.05 | 0.73 | 0.83 | DEthreader | ------SPDSPEMKDFRGYIQKYLGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMGMTNYIFNLALADALATSTLPFQSAKMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIACHPVMRLRRTVLVVGAFVVCWAPIHHLCIAL------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |