Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | FERFSSKVAQATGSPWAFFIAMGAILVWAITGPVFHYSDTWQLVINTGTTIITFLMVFVIQKSQNKDSKSVQLKLNELIAANKSASNRLIVVEDLSEDELDTLHNYYCRLAEETKKRMDMKESHSVE |
1 | 4mcwA | 0.08 | 0.07 | 0.92 | 1.00 | DEthreader | | -------KIANEKDRNVLLFLTDLAKEMADVNKTSVFTEEDIELLRHISLYASSTIEAILYEKLKKAHEDVIYRLSHATKFKKVGIKHTIGYEKLQIADIIYGRMTSISDVFDALTSDRKKAWD--- |
2 | 2yfaA | 0.06 | 0.06 | 0.91 | 1.00 | DEthreader | | ---LQYMIGDAAANAKLDAFSKQQAYLATTF-K-SPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQDRQL-VRIVRGIAENSANEAALRQLDAALADTDNLKRQLP----- |
3 | 3u0cA | 0.03 | 0.02 | 0.50 | 0.61 | DisCoVER | | DYEKQINKLKNAD--SKIKDLENKINQIQTRLSELPEKKKLSREEIQLTIKKDAARLIEQKTLSI-------------------------------------------------------------- |
4 | 1vw4T | 0.06 | 0.05 | 0.85 | 0.83 | DEthreader | | -IPELRH-KSFNDLHSLWYNCLREQNVLARENH--LLKGSTHDEFSELSNSIRTMWQIRHVLNERELAYSASREFLQD-E-S-ERKKFLDTLADYVAMLTRFQLAIFGDNFIDGI------------ |
5 | 3jacA | 0.03 | 0.03 | 1.00 | 0.61 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
6 | 4wpeA | 0.05 | 0.05 | 0.98 | 0.58 | EigenThreader | | ILFFKQRSELEKD---YARRLGAITGKLDKDIGTNDYNETFNVVLSVEKARAQSHSKQSEILFRQIVLQKKLQDAQIRFRDLQLNWESNSQEYKVQLDVLKQEYKASQKFWIHEWAQLSCELQEENA |
7 | 3wo6A | 0.11 | 0.09 | 0.84 | 0.31 | HHpred | | ------PITSESEGIWNH--FFVYPMSWLITTVANLLNGSYGLSIIIVTILIRLALLP-LTLKQQKSMQVIRPEMEAIQKKYKEKA-------SKDPKVQQEMQKELLGLYQKHGVNPMAGCL---- |
8 | 3qf4B1 | 0.14 | 0.13 | 0.94 | 0.27 | MRFsearch | | --RVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLREEKEMEKFDRVNESLRKVGTKAQIFS------ |
9 | 3rauA2 | 0.14 | 0.13 | 0.92 | 0.65 | FFAS-3D | | --RISAQVVDYYKEACRAL------ENPDTASLLGRIQKDWKKLVQMYFAAVAHLHMGKQAEEQQKFGERV-AYFQSALDKLNEAIKLAKGQPDTVQDALRFTMDVIGGKYNSAKKDNDFIYHEAV- |
10 | 5cwjA | 0.15 | 0.13 | 0.85 | 0.71 | SPARKS-K | | AIRVILRIAKESGSEEALRQAIRAVAEIAKEAQ------------DSEVLEEAIRVILRIAKESG-SEEALRQAIRAVAEIAKEAQDP--RVLEEAIRVIRQIAEESRRQAERAEEEIRRRAQ---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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