Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | NLNANWVNAKGAWTIHIVLICLLKVLYDIIPGVSQETSWTLTNISYMFGSYIMFHWVRGVPFEFNGGAYDNLNMWEQIDDGAQYTPAKKFLLSVPIVLFLLSTHYTHYDLTYFTINFLAVLAVVIPKLPFSHRMR |
1 | 5yfpD | 0.08 | 0.07 | 0.87 | 1.00 | DEthreader | | TKVAFNIITERAKEEIHNIIVKSTESIRSHPSLLKLSILRECFWEIFLKLLYAIQCHRAIFEMSNILQ---------K-----KIWGKLLDEIELLLVRYINDPELINMK-VILDPFLLFTQSTSTIPSVLTQ-- |
2 | 5yd1A | 0.08 | 0.07 | 0.93 | 1.00 | DEthreader | | AGLDSVVY--LRIYWLGLKIFAPIAMLAAV-AHIMAYAFTIWTCYMLMKEYETVANMRLQFLASEGRRQ------WA-DISSFLRAFFDVHGRVITALIISQLLLMAAFIALPVITIGFHRFCKGFEPFVRYPLQ |
3 | 5y50A1 | 0.05 | 0.04 | 0.77 | 0.65 | DisCoVER | | AIAVSFCS-VTGFSVVFGLASALETLCGQANGAKQYEKLGVHTYGIVSLFIPLSLLWTYIGLSAMVAQEAGKFA-TWL--------IPALFGYATLQPLVRFFQAQSCS-KS--RA--T---------------- |
4 | 6oceA | 0.07 | 0.07 | 0.90 | 1.00 | DEthreader | | INHAGLD---SAVYLRIYLTGIKIFVPISILLYAVTFWTCYVLFREYEIITTMRLRFLAS-EKRR--SR--W----AVCAQEWAPSSG-AQ-FWPSVHGRIIIALIQLPVLTFWFYKYCKNRFEPAFVRNPLQEM |
5 | 3dqbA | 0.06 | 0.06 | 0.95 | 0.51 | CEthreader | | QFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGY-------FVFGPTGCNLEGFFATLGGEIALWSLVVLAIEFGENHAIMGVAFTWVMALACAAPPLVGWS |
6 | 6d4hA | 0.07 | 0.07 | 0.93 | 0.75 | EigenThreader | | AAILEAWQRTYVEVVHQSVGYLLMLAYACLTMLNAATFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRT----------GASVALTSISNVTAFFMAALIPIQAAVVVVFNFAMVLLIFPAILSMDL |
7 | 1vt4I | 0.09 | 0.08 | 0.90 | 0.30 | HHpred | | -PKESTISIPSIYLELKLHRSIVDHYNIPKTFDSYLDQYFYSHIGHH-------LKNIEHPERMTRMVFLDFRFLEQKIRSTAWNASGSILNTLQQLKFYK-PYICDNDPKY--ERLVNAILDFLPKIEENL--- |
8 | 5fgnA | 0.09 | 0.07 | 0.77 | 0.30 | MRFsearch | | --SSALIAFLSLYSSLVLNYAFFAKVVELHPFTGADIFLYTMPVVLFFLSNFVFHVIA-------------------------LPFVHKVLIPLILVISAAVSYQEIPGYVLWIVCLGVLPALAYIAVKVK---- |
9 | 3am6A | 0.08 | 0.07 | 0.79 | 0.53 | FFAS-3D | | ---MIAQ-----WIVFAIMAAAAIAFGVAVHFRPLKSAYYINIAICTIAATAYYAMAVNYQDLT-------------MNGERQVVYARDWVLTTPLLLLDLI-VMTKMGGVMISWVIGADIFMIVFGI------- |
10 | 7a23I2 | 0.07 | 0.07 | 0.96 | 0.92 | SPARKS-K | | ALAAMAQTKVKRLLAYSSIGHVGYICIGFSCGTIEGIQSLLIGIFIYALMTMDAFAIVLALRQTRVKYIADLGAL-----AKTNPILAITFSITMFSYALFFAALGCGAYFLALVGVVTSVIGCFYYIRLVKRMF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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