Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TTFHLLEAGIIPDICIVDNRTKRKPVSRDVSARNRDKVYEEVSVDNPAGIITDELIKTLCEAFASEKLLRIFVRGEEDLATLPVILMAPLGSVVLYGQPDEGVVFVEVTEEKKEEIRALFEKL |
1 | 4n48A | 0.09 | 0.09 | 0.94 | 1.00 | DEthreader | | KMANMDFFRMFTYFADVCAG----PGG--FSEYVLWKAKLFEPYGDITRPENSAFRNFVLDNTDRK-VHFLMADGGLLCQFLMALSIVRTGGHFICKTFERYVVCKGLKVGIDDVRDYLFAVN |
2 | 5fqlA | 0.05 | 0.05 | 0.89 | 1.00 | DEthreader | | ---------ALNVLLIIVDDLRAAVSRVSLTSTIPQFKTMSVGPEECP-LPDKQSTEQAIQLLKMPFFLAVGYHKPVLDQVGRLLSALLANTIIAFTSTHVPLIFYVPPEKLF--PY-LDPFD |
3 | 2mr6A | 0.10 | 0.08 | 0.84 | 0.78 | DisCoVER | | ----------MGVVILVLT-GDERIAEE-LRKEVQHDNVKTVPTKD----K-EKVKEEIEKARKQGRPIVVFVRGDDERAKDIAEYAQKEGLRVIVIVSQYEDKKKGYDVYTSRNEDEAK--- |
4 | 6y79A | 0.11 | 0.11 | 0.96 | 1.00 | DEthreader | | AVDVSIAGIEDADAILLTNPRREAAVMNARIRKAWLQELEIASVGP----THADLEKALSEFGEVNAKPLIIVGSGITAFFNTIGKFVESPLNYNVLQRANTEGTFGDV-AVQHSLVGPNGSV |
5 | 2mr6A | 0.12 | 0.11 | 0.88 | 0.54 | CEthreader | | ----------MGVVILVLTGDE--RIAEELRKEVQKHDPNVKTVPTKD---KEKVKEEIEKARKQGRPIVVFVRGGDDERAKDIAEYAQEGLRVIVIIVSQDKKKKGYDVYTSRNEDEAKKKL |
6 | 3nmeA | 0.11 | 0.11 | 1.00 | 0.47 | EigenThreader | | CLQDVDKLRKIGVTIFCLQQEYFGVDISSIQAYAKKYSDIQIRCDAFDLRRLPAVVGTLYKAVKRNGGVYVHSTGRAPAVALTYILTGGFSRVEISGLDIGWGQRIPLTTRERLSERSKLIQF |
7 | 6j27A | 0.17 | 0.15 | 0.89 | 0.31 | HHpred | | IWEGLARRGL---LRVEEGLDLLAEVPRLPGRAFLAKERPEAIQDFDQGYVTPESTLRVALAWNWGEGKEVLVLGDDDLTGLAAALTG----------LPKRVVVLDADPRIVRFLERAAKAE |
8 | 4h51A2 | 0.09 | 0.09 | 0.98 | 0.43 | MRFsearch | | --YGVVKAAGWKNICTYAYYDPKTVNFEGMKKDILAADGSVFILHQCTGVPSQEQWNEIASLMLA-KHHQVFFDSATDAYAARLFARRGIEVLLAQSFERAGTLSLLLDKTKRADVKSVMDSL |
9 | 4h51A2 | 0.11 | 0.11 | 0.98 | 0.46 | FFAS-3D | | --GVVKAAGWKNIYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHNPTGVPSQEQWNEIASLMLAKHHQVFFDSAYQGYAAARLFARRGIEVLLAQSFSNMGTLSLLLKADVKSVMDSLIREE |
10 | 2l82A | 0.16 | 0.15 | 0.93 | 0.78 | SPARKS-K | | IVREIKRQGVR---VVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDK-----EDFRENIREIWERYPDVVVIVTTDDKEWIKDFIEEAKVEVFVVYNNKDDGVDVRTVSEELIEQVRRFVRKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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