>PF04015 (205 residues) VLLKVNLLSPKEPEQAVTTHPQLVKVICELVKELGANPIVGDSSGGMTSKGSRTNRAFQI SGIQQAAEEAGAEIVNFDEAGSVEMTSQVQGNTYQFYVAQPVIEADVIINLPKLKTHGLT YFTGAVKNMYGVLPGNQKRDLHRKYPDTDEFSRLLSVLYDTVKPDLTIMDGIWSMEGNGP SAGTRKDLGLILASKDGVALDEVAC |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VLLKVNLLSPKEPEQAVTTHPQLVKVICELVKELGANPIVGDSSGGMTSKGSRTNRAFQISGIQQAAEEAGAEIVNFDEAGSVEMTSQVQGNTYQFYVAQPVIEADVIINLPKLKTHGLTYFTGAVKNMYGVLPGNQKRDLHRKYPDTDEFSRLLSVLYDTVKPDLTIMDGIWSMEGNGPSAGTRKDLGLILASKDGVALDEVAC | |||||||||||||||||||
1 | 2yjgA1 | 0.11 | 0.10 | 0.88 | 1.33 | DEthreader | IVIITSDHTR------PVPSRITLPLLLDEIRKKNANVKILIATGFHR---GTTLQEMKAKFGEDLVE--NEQFVVHDNENMELIGTLP--SGGKLEINKLAVEADLLVAEGFIEPHFFAGFSGGRKSILGIASVQCILANHCSFINANPIHRDMIYAAKKANLAFILNVVID----------SSHKIVNAFAG-HSEKAHLKGC | |||||||||||||
2 | 2yjgA | 0.10 | 0.09 | 0.88 | 1.33 | DEthreader | IVIITSDHT------RPVPSRITLPLLLDEIRKKNANVKILIATGFH--R-GTTLQEMKAKFGEDLVEN--EQFVVHDNENMELIGTLP--SGGKLEINKLAVEADLLVAEGFIEPHFFAGFSGGRKSILGIASVQCILANHCSFINANPIHRDMIYAAKKANLAFILNVVID----------SSHKIVNAFAG-HSEKAHLKGE | |||||||||||||
3 | 6d6zA1 | 0.16 | 0.14 | 0.87 | 1.41 | HHpred | VVILASDITRPS------PSHILIPPITDELNRAGISIKIVFGLGYH-RK-HTDDEKKTLVGEE-VFNR--IKCIDHDIDDCVYVG--TTKRGTPVEVFREVYNADFIIATGNLELHYKAGYSGGHKALLGVCSKNTIEKNHALMFDGNPMREDIEEGGKLARVDFIVLNSH-------------KEIVKVVSGDPIKAHREGA- | |||||||||||||
4 | 6d6zA1 | 0.12 | 0.11 | 0.87 | 1.28 | DisCoVER | VVILASDI------TRPSPSHILIPPITDELNRSDDSIKIVFGLGYH----RKHDDEKKTLVGEEVFN--RIKCIDHDIDDCVYVGT--TKRGTPVEVFREVYNADFIIATGNLELHYKAGYSGGHKALLGVCSKNTIEKNHALAMKINPMREDIEEGGKLARVDFIVNAVL--N----S-HK---EIVKVVSG-DPIKAHREG- | |||||||||||||
5 | 6d6zA1 | 0.15 | 0.14 | 0.89 | 1.20 | MRFsearch | VVILASDITRPSP------SHILIPPITDELNRAGISIKIVFGLGYHRK--HTDDEKKTLVGEEVFN---RIKCIDHDIDDCVYVGTT--KRGTPVEVFREVYNADFIIATGNLELHYKAGYSGGHKALLPGVSKNTIEKNHALMFDGNPMREDIEEGGKLARVDFIVNAVLNS----------HKEIVKVVSGDPIKAHREGAK | |||||||||||||
6 | 6d6zA1 | 0.15 | 0.14 | 0.88 | 1.23 | SPARKS-K | VVILAS---DITRPSPS---HILIPPITDELNRAGISIKIVFGLG--YHRKHTDDEKKTLVG-EEVFNRI--KCIDHDIDDCVYVGTKRGT---PVEVFREVYNADFIIATGNLELHYKAGYSGGHKALLGVCSKNTIEKNHALMFSEGPMREDIEEGGKLARVDF-IVNAVLN---------SHKEIVKVVSGDPIKAHREGAK | |||||||||||||
7 | 2yjgA1 | 0.10 | 0.09 | 0.87 | 1.37 | MAPalign | IVIITSD--H-----TRPVPRITLPLLLDEIRNKSANVKILIATGF----HRGTLQEMKAKFGEDLVEN--EQFVVHSSENMELIGTLPS--GGKLEINKLAVEADLLVAEGFIEPHFFAGFSGGRKSILGIASVQCILANNPYARTN-PIHRDMIYAAKKANLAFILNVVI----------DSSHKIVNAFAGHSE-KAHLKGC | |||||||||||||
8 | 2yjgA1 | 0.09 | 0.08 | 0.90 | 1.31 | CEthreader | IVIITSDHTRP------VPSRITLPLLLDEIRKKSANVKILIATGFHRG--TTLQEMKAKFGEDLVENEQFVVHDSRNSENMELIGTLPSG--GKLEINKLAVEADLLVAEGFIEPHFFAGFSGGRKSILPGIAFIKNPYARTGVLENNPIHRDMIYAAKKANLAFILNVVI----------DSSHKIVNAFAGHSEKAHLKGCE | |||||||||||||
9 | 6d6zA1 | 0.16 | 0.14 | 0.88 | 0.88 | MUSTER | VVILASDITRPSP------SHILIPPITDELNRAGISIKIVFGLGY--HRKHTDDEKKTLVG-EEVFNRIK--CIDHDIDDCVYVGTTKRGT--PVEVFREVYNADFIIATGNLELHYKAGYSGGHKALLGVCSKNTIEKNHALMFSEGPMREDIEEGGKLARVD-FIVNAVL-------SHKEIV---KVVSG-DPIKAHREGA | |||||||||||||
10 | 6d6zA1 | 0.14 | 0.13 | 0.88 | 2.25 | HHsearch | VVILASDITRPS------PSHILIPPITDELNRAGISIKIVFGLGYH-RK-HTDDEKKTLVGEE-VFNR--IKCIDHDIDDCVYVG--TTKRGTPVEVFREVYNADFIIATGNLELHYKAGYSGGHKALLGVCSKNTIEKNHALMFDGNPMREDIEEGGKLARVDFIV-NAVLNS---------HKEIVKVVSGD-PIKAHREGA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |