Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | GYGNPGYDNGNPFYKPRKHHRRRHGRRGRHGRHGRHGRRHSDSSDSSSESRSRSSSGSSSSESRSYERDYYYVPRWPTAPSYGNTGNDVPAGTAYGSPA |
1 | 5w3nA | 0.18 | 0.08 | 0.45 | 1.37 | MRFsearch | | ----SGYSQS--------------------------------------------------TDTSGYGQSSYSSYGQSQNTGYGTQSTSQSSQSSYGQQS |
2 | 3bogA | 0.16 | 0.12 | 0.77 | 1.27 | SPARKS-K | | ----------------------CKGADGAHGVGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVAGGASGGTGVGGRGGKGGSGKGADGAPGAP- |
3 | 5w3nA | 0.00 | 0.00 | 0.40 | 0.78 | DisCoVER | | ---SYSGYSQSTDTS--------------TQSTPQ------------------GYG---------------STGGYG----SQSSQSSYGQQ--SS--- |
4 | 4d77A | 0.04 | 0.04 | 1.00 | 0.70 | CEthreader | | ALYFDRKYLFANSKTYFNIAVDEKGLWIIYASSVDGSSILVAQLVTDTKDTRVTFAFDLLRGKQINANFGLRMSQSVLAMLSYNMRDQHLYSWEDGHLM |
5 | 5mq4A | 0.07 | 0.07 | 0.99 | 0.53 | EigenThreader | | TTGSTIAEIRRLRIEIEKLQWL-HQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEANTSYCDYPCQQAHW |
6 | 1vw4R | 0.26 | 0.05 | 0.19 | 0.32 | HHpred | | -ALEPGVVYLDPF-HPKRKFI------------------------------------------------------------------------------ |
7 | 5h7uA | 0.26 | 0.10 | 0.39 | 0.88 | MRFsearch | | ---------------------------------SELDQESDDSFFNESESESEADVDSDDSDAKPYGPDWFK--------------------------- |
8 | 2awbD | 0.20 | 0.16 | 0.82 | 0.36 | FFAS-3D | | GKGFAG-------------TVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQVVRVDAERNLLLVKGAVPGATG----- |
9 | 3boiA | 0.15 | 0.12 | 0.80 | 1.24 | SPARKS-K | | -------------------CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVGGRGGKGGSGTPKGAD-GAPG |
10 | 5h7uA | 0.26 | 0.09 | 0.35 | 0.95 | CNFpred | | -------------------------------SESELDQESDDSFFNESESESEADVDSDDSDAKPY--------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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