>PF03956 (191 residues) VGFFALGSLVGITGLLPFDITQTDISFYALAALMCSVGLSVGNDPQTLKNFRSLNPKLVF LPIMTIVGTLAGSALCSMMLEHRSLTDCLAVGSGFGYYSLSSIFITEYKGAELGTIALLA NISREILTLLAAPLMVRWFGNLAPISAGGATTMDTTLPIITRTAGQEFVVVSIFHGFIVD FSVPFLVTFFC |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VGFFALGSLVGITGLLPFDITQTDISFYALAALMCSVGLSVGNDPQTLKNFRSLNPKLVFLPIMTIVGTLAGSALCSMMLEHRSLTDCLAVGSGFGYYSLSSIFITEYKGAELGTIALLANISREILTLLAAPLMVRWFGNLAPISAGGATTMDTTLPIITRTAGQEFVVVSIFHGFIVDFSVPFLVTFFC | |||||||||||||||||||
1 | 5a1sA | 0.10 | 0.10 | 0.97 | 1.17 | DEthreader | PVIFLVAAFVYGIFTQKEID-I-SNVMDKSNFLNLFIAVLITGALSVNRLLLKSLLGYIPTILAGIVGASLFGIVIGLCFGIP-VDRIMMYVLIMGGGNGGAVLSREEYYSTAIAILTIANIFAIIFAALLDMVGKKYLSGYISIAGLMANGGDLELSAC-NR-MN-LISYAQISSRLGGGIVLVIASIVF | |||||||||||||
2 | 6iwwA | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | ------LLLPIFGL---VLALFYVAIGVAPLVIFMGVGAMT--D--FG-PLLANPR-TLLLGAAAQ-FGIFATVLGALTLYSFTLPQAAAIGIIGGADGPAIYLSGAPELLGAIAVAAYSYMALVLIQPPIMRATSEKERKNPLIGSAGVSAVPMAARVSNKVGLLMHAMGPNVAGVIGSAIAAGVMLKVL | |||||||||||||
3 | 4cz8A | 0.12 | 0.10 | 0.89 | 1.00 | SPARKS-K | PIFILTGLVIGPLKLIPRDLIFDFVRVFGLVIILFTEGHNLSW-----RLLKKNPTIVTLDTIGLILTALIAGFIFKVVF-NSSFLLGFLFGAIIG--ATDPATLIPLFRQDIETVIVTESIFNDPLGIVLTLIAISLVPGYGG-------------GIFSTLSEVIYFLYNVSVSISLGIFLGILGYKFI | |||||||||||||
4 | 4bwzA | 0.17 | 0.16 | 0.94 | 1.16 | HHsearch | IGEVLAGVLVGPALLGHEGEILEFLAELGAVFLLFMVGLETRLK-----DILAVGKEAFLVAVLGVALPFLGGYLYGLEI-GFETLPALFLGTALVATSVGARVLQELGSRPYSRIILGAAVIDDVLGLIVLACVNGVAETGQ-VE-----VGAITRLILERLPGLAPIVGAFLGGMLLSEVESFLAPIFF | |||||||||||||
5 | 6iwwA | 0.15 | 0.13 | 0.85 | 1.00 | DEthreader | ----------------------VS-LLLWLAFEPLLLIFGVGAMT-DFGPLLANPR-TLLLGAAAQFGIFATVLGALLNLISFTLPQAAAIGIIGGDGPTAIYLSGKLAP-ELLGAIAVAAYSYMALVPLIQPPIMRATERPLIGSAGVSA-VPMAARVSNKVGLLHAMGPNVA-GVIGSAIAAGVMLKVL | |||||||||||||
6 | 6iwwA2 | 0.10 | 0.09 | 0.88 | 1.00 | DEthreader | KEPLL-LPI-FG-----V-LFYAVAPLVIFMGVGAMT--DF--G-PLLANP-RTLL-LGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIGGDGPTAIYLSGKLAPE-LLGAIAVAAYSYMALVPLIQPPIMRATRLIGSAG--V--S---AVPMAARVNLMHAMGPNVAGVIGSAIAAGVMLKYVL | |||||||||||||
7 | 6iwwA2 | 0.10 | 0.09 | 0.92 | 1.00 | DEthreader | ------LLLPIFGL---VLALFYVAIGVAPLVIFMGVGAMT--D--FG-PLLANPR-TLLLGAAAQ-FGIFATVLGALTLYSFTLPQAAAIGIIGGADGPAIYLSGAPELLGAIAVAAYSYMALVLIQPPIMRATSEKERKNPLIGSAGVSAVPMAARVSNKVGLLMHAMGPNVAGVIGSAIAAGVMLKVL | |||||||||||||
8 | 4n7wA | 0.15 | 0.13 | 0.84 | 1.16 | HHsearch | PVWALLLSVAAYFRPTT-FTGIGPYVGPLLMLIMFAMGVTLRLDD--FKRVLS-RPAPVAAAFLHYLIMPLTAWILAMLF-RMPPSAGMVLVGASGTASN--VMIYLAKGDVA--LSVTISAVSTLVGVFATPLLTRLYVDAT-I---------------------SVDVVGMLKSILQIVVIPITAGLVI | |||||||||||||
9 | 6iwwA2 | 0.15 | 0.13 | 0.85 | 1.00 | DEthreader | ----------------------VS-LLLWLAFEPLLLIFGVGAMT-DFGPLLANPR-TLLLGAAAQFGIFATVLGALLNLISFTLPQAAAIGIIGGDGPTAIYLSGKLAP-ELLGAIAVAAYSYMALVPLIQPPIMRATERPLIGSAGVSA-VPMAARVSNKVGLLHAMGPNVA-GVIGSAIAAGVMLKVL | |||||||||||||
10 | 6iwwA | 0.10 | 0.09 | 0.88 | 1.00 | DEthreader | KEPLL-LPI-FG-----V-LFYAVAPLVIFMGVGAMT--DF--G-PLLANP-RTLL-LGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIGGDGPTAIYLSGKLAPE-LLGAIAVAAYSYMALVPLIQPPIMRATRLIGSAG--V--S---AVPMAARVNLMHAMGPNVAGVIGSAIAAGVMLKYVL | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |