>PF03901 (414 residues) AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGKGFQTWEYSPVYAIRSYAYLLLH AWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLS TGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTPIAVLGVAAGTIVGWPFSAALGLPIAFD LLVMKHRWKSFLRWSLVALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTSHGPDLYGT EPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFII FFIQPHKEERFLFPVYPLICLCGAVALSALQQYRLEHYTVTSSWLALGTVFLFGLLSFSR SVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | AFKCLLSARLCAALLSNISDCDETFNYWEPTHYLIYGKGFQTWEYSPVYAIRSYAYLLLHAWPAAFHARILQTNKILVFYFLRCLLAFVSCICELYFYKAVCKKFGLHVSRMMLAFLVLSTGMFCSSSAFLPSSFCMYTTLIAMTGWYMDKTPIAVLGVAAGTIVGWPFSAALGLPIAFDLLVMKHRWKSFLRWSLVALILFLVPVVVIDSYYYGKLVIAPLNIVLYNVFTSHGPDLYGTEPWYFYLINGFLNFNVAFALALLVLPLTSLMEYLLQRFHVQNLGHPYWLTLAPMYIWFIIFFIQPHKEERFLFPVYPLICLCGAVALSALQQYRLEHYTVTSSWLALGTVFLFGLLSFSRSVALFRGYHGPLDLYPEFYRIATDPTIHTVPEGRPVNVCVGKEWYRFPSSFLLP | |||||||||||||||||||
1 | 7bvfA | 0.11 | 0.10 | 0.90 | 1.17 | DEthreader | ADAAVIATLLLWHVIGAT-SSDDGYL-LTVARVAP--KAGYVANYYRYFGTTEAPFDWYTSVLAQLAAV---S-T--AGVWMRLPATLAGIACWLIVSFVLRRLGLANAVFTAGAVFLSA--WLPFNNGLRPEPLIALGVLVTWVLVERSIPAVAIIVATLTAT-LAPQGLIAL-APLLTGARAIQRILAPLAVLAAALSLI-TVVVFR--D--QTLATVAESARIK--Y-KVG-P-TIAWQDFLRYYFLTVGRRFAVLVLLFCLFGVLFVLLRRG-RVAGLASGPAWRLIGTTAVGLLLLTFTPTKWAVQFGAFAGLAGVLGAVTAFTFARIGL-HS-RRNLTLYVTALLFVLAWATSGINGYDISKGLV-SNAAITDSAGTAG------------LMDIATAPQASSLWQSG | |||||||||||||
2 | 7bvcA | 0.10 | 0.09 | 0.93 | 1.17 | DEthreader | TDTGVIGGLLIWHIVG-APTSDD-GYNMTIARVA-SEAGYTTNYYRYFGAS-EAPFDWYQSV-LSHLAS--IS-TA--GVWMRLPATAAAIATWLIISRCVLPRGVANAMLTAGATFLAA--WLPFNNGLRPEPLIAFAVITVWMLVENSRLWPAAVAIVIAMFSTLAPQGLIALAPLLVGARAIGRVTISLAPLAASV-AVVFVIIFRDQT-LATVAESVRIKYVVGPTIPW-Y--QE-FLRYYFLTVGSLTRRFAVLVLLLCLFGLIMVLLRRGRVPG--VSGPLWRLCGSTAIGLLLLILTPTKWAIQFGAFAGLAGALGGVTAFAFARVGL-HS-RRNLALYVTALLFILAWATSGLNGFDKQVAA-YYEEIDIFNLRFPLRVPVLQTAQYLRDDWY--RDWGSIE---- | |||||||||||||
3 | 5ezmA | 0.14 | 0.13 | 0.92 | 2.84 | HHpred | FVAVALVVWFVSLDMRHLVGPDEGRYA-EISREMFASGDWVT----IRYNALKYFKPPFHMWVTVVGYELFGLGE----WQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGDGWMVACWAAMGVAILTKVGIALPGLVLVVYTLVTRDWGLWLALGVVVMLVITVPWFYLVSVRNP----EFPNFFFIHEHWQR-----RSGSVFYFLPLVIGGFLPWAG----IFPKLWT--AM-R-----ARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLAFVVMLLGIAVARLLLRRGVLLGHETVGRPASGAQIAQKLTPEMPLYGVQML---DHTLFYL- | |||||||||||||
4 | 5ezmA1 | 0.13 | 0.09 | 0.70 | 0.99 | DisCoVER | --AVALVVWFVSLDMRHLVGPDEGRYAE-ISREMFASGDWVTIRYNALKYFEKPPF---HMWVTVVGYELFGL----GEWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLHARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTWGLWRR--LHLALGVVVM---------------LVITVPWFYLVSVRNFPNFFRSGSVFYFLPLVIGGFL-PWAGIFPKLWTAMR-------ARF----RPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDR------------------------------------------------------------------------------------- | |||||||||||||
5 | 6p25A2 | 0.12 | 0.11 | 0.89 | 0.37 | MRFsearch | LAVFTAVIRLHGLAWPDSVVFDEVHFG-GFASQYIRGTYF------------MDVHPPLAKMLYAGVASLGGFPSTTPYVLMRFFSASLGALTVILMYMTLRYSGRMWVALMSAICFAVENSYVTISRYILLDAPLMFFIAAAVYSFKKYYKSLLATGIALGMASSSKWVGLFTVTWVGLLCIWRLIFKVAFAKLAFLLGVPFALYLVFFYIHFQSLKFIESHKKMWHINKNRGISYWGENNRNVYLLGNAIVWWAVTAFIGIFGLIVITELFSWQLGKPIFHVQVIHYLLGFAVHYAPSFLMQRQMFLHHYLPAYYFGILALGHALDIIVSYVFR-SKRQMGYAVVITFLAASVYFFKSFSPIIYGTPWTQELCQKSQWLS-------------------------------- | |||||||||||||
6 | 5ezmA | 0.14 | 0.12 | 0.90 | 2.03 | SPARKS-K | FVAVALVVWFVSLDMRHLVGPD-EGRYAEISREMFASGDWVTIRYN---ALKYFEKPPFHMWVTVVGYELFGLG----EWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGRGWMVACWAAMGVAILTKLVGIALPGLVLVVYTLVTWRRLHLALGVVVMLVITVPWFYLVSVRNPE------------------------------FPNFFFIHEHYFLPLVIGGFLPWAGIFPKLWTAMRARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRAMGMYLGFTVALLGHETVGRPASGADIAQKLTPEMPLYGVQ--MLDHTLPFYLR | |||||||||||||
7 | 3wajA | 0.12 | 0.11 | 0.97 | 1.24 | MAPalign | AALISVKLRISVFVR--LGGNDPW-YYYRLIENTIHNPHRIWFDFTYYPYGSYTHFGPFLVYLGSIAGIIFATSGESLRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAIVPGFLQRSGFNDHHIWEAFWQVSALGTFLLAYPVIAGITIGLYVLSWGFIIAPIILAFMFFAFVVNADRKNLSLVAVVTFAVSALIYLPFATIFYSPFQLLVLLGSAVIYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGALFFFGMAGILYSAYRFKRRSFPEMALLIWAIAMFIAL----WGQNRFAYYFAAVSAVYSALALSVVFDKLHVAFALLIALAAIYPTYILKQWYDALTWMRENTPDGEKYWWDYGHWIEAVAHRM-------PIANPFQAGIGNKNVPGAS | |||||||||||||
8 | 5ezmA | 0.11 | 0.10 | 0.94 | 0.92 | CEthreader | FVAVALVVWFVSLDMRHLVGPDEGR-YAEISREMFASGDWVTIRYN---ALKYFEKPPFHMWVTVVGYELFGLG----EWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPEFPNFFFIHEHWQR-----RSGSVFYFLPLVIGGFLPWAGIFPKLWTAMR------------ARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLPSVAVYAMGMYLGFTVALLGHETVGRPASG | |||||||||||||
9 | 3wajA1 | 0.12 | 0.11 | 0.98 | 1.16 | MUSTER | AALISVKLRILNPWNSRLGGNDPWYYYRLIENTIHNFPHRIWFPFTYYPYGSYTHFGPFLVYLGSIAGIIFSTSGESLRAVLAFIPAIGGVLAILPVYLLTREVFDKRAAVIAAFLIAIVPGQFLQRSILGHHIWEAFWQVSALGTFLLAAYPVIAGITIGLYVLSWGAGFIIAPIILAFMFFAFVLRKNLSLVAVVTFAVSALIYLPFAFNYPGSTIFYSPFQLLVLLGSAVIAAAFYVIVLTALIMGLFFVLTNAVLHFGALFFFGMAGILYSAYRFLKRRSFPEMALLIWAIAMFIALWGQ----NRFAYYFAAVSAVYSALALSVVFDKLHFRV-----AFALLIALAAIYPTYILADAQSSYAGGPYDALTWMRENTPDGEKYDEYYLQLYPTPSNKEPFSYPFTYGVI | |||||||||||||
10 | 5ezmA | 0.13 | 0.12 | 0.92 | 3.65 | HHsearch | FVAVALVVWFVSLDMRHLVGPDEGRYA-EISREMFASGDWVTIR----YNALKYEKPPFHMWVTVVGYELFGLGE----WQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGDGWMVACWAAMGVAILTKGLVGIALPGLVVYTLVTRDWGLWLALGVVVMLVITVPWFYLVSV--RN---PE--FPNFFFIHE-HWQR-RSGSVFYFLPLVIGGFLPWA----GIFPK-LWT-A-MR-----ARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLVMLLGIAVARLLLRRGLGHE--TVGRPAS-GADIAPQIQKLTPEMPLYGVQML-DHTLPFYLR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |