Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | AYTRWLRPNEIHALLCNHKFFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGNDNPTFVRRCYWLLDKSQEHIVLVHYRE |
1 | 3ulxA | 0.13 | 0.12 | 0.88 | 1.00 | DEthreader | | GFRFHPTDDELEHYLCRKGRLPIAEVALFGAR-EWYFFT---PRD-NRAA-GYW-K------ATGADKPVAPRGRTLGIKKALVFYVKTDWIMHEYRLADAGRLDWVLCRLYN |
2 | 7k7vA | 0.17 | 0.16 | 0.93 | 1.32 | HHsearch | | PPAPQLPIPAVVDILTKASQALFSWTLIDQPPDGSLFLVWQAPTLPSPPDGMHFMS-------NERFFNMDVAGK-VLEIHEYPSETRTMHVRCRYRLLGVGFDNFWLVHYFQ |
3 | 1ut7B | 0.10 | 0.09 | 0.88 | 1.00 | DEthreader | | GFRFYPTDEELVQYLCRKGYSLQIAEALFGEK-EWYFFS---PRD-PNRVA-YW-K------ATGTDKIISTEGQRVGIKKALVFYTKTNWIMHEYRLI-EPSDDWVLCRIYK |
4 | 3ulxA | 0.13 | 0.12 | 0.87 | 1.00 | DEthreader | | A--RFHPTELVEHYLCRKGQRL--EVDLFDLPREWYFFT---PRDRSRNRAAYWK-------ATGADKPVAPRGRTLGIKKALVFYKT-DWIMHEYRLADAGRLDWVLCRLYN |
5 | 2aydA | 0.15 | 0.09 | 0.58 | 0.31 | HHpred | | ------------------------------------IVVHTQTLFDIVNDGYRWRKYGQ-KS---------VKGSPYPRSYYRCSSPGCPVKKHVERSSHD--TKLLITTYEG |
6 | 2aydA | 0.12 | 0.07 | 0.58 | 0.78 | DisCoVER | | ----S----------------------------RIVVHTQTLFD-IV-NDGYRWR---------KYGQKS-VK-GSYPRSYYRCSSP-GCPVKKHVERSSHDTKLLITTYEG- |
7 | 1yjdC | 0.14 | 0.06 | 0.44 | 0.42 | MRFsearch | | ------------------------------------------------------------ILVKQSPMLVAYDNAVNLSCKYSYNLF--SREFRASLHKGLDSAVEVCVVYG- |
8 | 7k7vA | 0.19 | 0.18 | 0.93 | 0.82 | SPARKS-K | | ANLPYLPIPAVVDILTKASQALPQISLIDQPPDGSLFLVWQAPTLPSPPDGMHFMSN-------ERFFNMDVAGK-VLEIHEAKSETRTMHVRCRYRLLGVGFDNFWLVHYFQ |
9 | 1wznA | 0.09 | 0.07 | 0.83 | 0.76 | MAPalign | | ----YFDEEDLRKLFS---------KVAEALKPGGVFITDFPCG------PVVWNEQKGEEKLVIMDWREVEAVQKLRFKRLVQILRGEVKAFLVDDELNIDMRYWIVGIAKS |
10 | 2aydA | 0.12 | 0.07 | 0.60 | 0.49 | CEthreader | | ----------------------------------SRIVVHTQTLFDIVNDGYRWRKY--------GQKSVK---GSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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