Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | DNLFLHTIATSTENIPSITSAYNPLMTKVMDIYCKTAPSLALILFILTFKTRKLIKKTNRNAVLRSCLLSPFVCAVFLYLLCFRNLELTTAGRPARLMTNNDATLLLFYIGLYLIIFFISYFTLFTPVTTFKLLKERQ |
1 | 4widA | 0.05 | 0.04 | 0.90 | 1.17 | DEthreader | | KMQHVDLLEKMLADEEKL-IREQLTDIRKVFSDKFEKLEQGIQNSYLLLDKLKTFMEKFVML-I-TKKDDIKDRVTYTCMKYLLMMQG----------NNFT-HLVTTLGMALYKEGHQKNDEAMLGMHTPITMLSDQ |
2 | 6xiwA | 0.08 | 0.07 | 0.91 | 1.00 | DEthreader | | SALLSILLLTLMLVFAG-RNFNNAMLALFEVLSLCGLTLFVGVVIANFNENKGEDSIAKMLLLTVVSM-S------FRIVTGEDW-NK----IMHDCMVNYAGALMYFCSFYVIIAIMLNLLVAIIVENFSLFYSLSY |
3 | 5xu1M2 | 0.08 | 0.07 | 0.88 | 0.65 | DisCoVER | | -MIGI---------IIGVSSVVVIMALGDSISLFVGGTGVMNIMLVSVTERTRIGL--RKATRANILIQFLIESMILTL-LGGLIGLTIASGLTALAGIEVG--VSIPVASLSASVGMIFG-VLPANKASKLDPIEA- |
4 | 4widA1 | 0.08 | 0.07 | 0.84 | 1.00 | DEthreader | | DEKMLADEEK-LTEFNL----RADEIIREQLTDIRKVFSDKFEKLEQGIQNSLLLDITKK-DDIKDRVTYTCMKYLLMAMQGTG--GP----------QKEVAFHVNNFTHLVTTLGMALYKEGHQKNDEAMLG---- |
5 | 5n77A | 0.07 | 0.07 | 1.00 | 0.51 | CEthreader | | ELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVIMEGEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQAREILRDIESLLPHNESLFQKVNFLMQAAMGFIN |
6 | 4f4cA5 | 0.07 | 0.07 | 1.00 | 0.80 | EigenThreader | | TTTLEKLLLFIGTLVAVITGAVWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSTTFSSQLAVLGTAQGAASGIYEVLEAIENNFCEKL |
7 | 6uo8A | 0.17 | 0.12 | 0.72 | 0.24 | HHpred | | ------------------SSRKMNTWLGIFYGYKG---LLLLLGIFLAYETKSVTEKINDHRAVGMAIYNVAVCLITAP-VTMI---LSSQ---------QDAAFAFASLAIVFSSYITLV-VLFVPKMRR-LIT--- |
8 | 5k47A | 0.12 | 0.12 | 0.93 | 0.33 | MRFsearch | | --AIGINIYRTSNVEVLLQFLEFPNFEHLAYWQIQFNNIAAVTVFFVWIKLFKFILSTTMSRCAKDLFGFAIMFFIIFLAYAQLFAEIEEA--------NRVLGPIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDL |
9 | 6xjhA | 0.12 | 0.12 | 0.96 | 0.72 | FFAS-3D | | ---SLIATQSILMANSMDNPKHIIVYGSVFAAAKWLLLIIGLMFVVKTITQLYMSKVKTRVGYIISKTISIILISILFALIHYVILIVVQASSNGKNLAFSKYVDNLWFFLIFLLFFGLFLFLISLGVFLVLIVP--- |
10 | 6v3fA | 0.13 | 0.12 | 0.91 | 0.76 | SPARKS-K | | GAVLAAMGFYSYLGVPS-----SLVIIQVVPFLVLAVGADNIFIFVLEYQRLPRMPGEQREAHIGRTLGSVAPSMLLCSLSEAICFFLGA-------LTPMPAVRTFALTSGLAIILDFLLQMTAFVALLSLDSKRQE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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