Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LTGCATTVPQAIREPPPNDPVVAEVRRDPAAYAGQRVRWGGTVASVENRRDETRLEIVARELGSNGRPRETDRSQGRFIARVQGFLDPAVYTSGRQVTVSGTLEQTVTRPIGQYSYTFPLVRADSVYLWERMPDRRNYYYYDPFWPYDPFW |
1 | 3ebeC | 0.06 | 0.05 | 0.84 | 1.00 | DEthreader | | QQYHVEKSMERKMNGRKLIRQLQNKIAT-EKLEEEDWVTFGVIKKITPF----SIWRL-N-------DLKDLDKYISLFLFGDVKEHWK-TDQGTVIGLL-NAN-PM--G---TDEVCLSVDNQKVLLMGDAVDLNCEYVQKKVSKRA--- |
2 | 3ja84 | 0.11 | 0.09 | 0.77 | 1.00 | DEthreader | | --------LDPYN-VG-SCKGMREL--N-PNDIDKLINLKGLVLRSTVIPDKQVIKLQETPDF---------QTPHSISLCVYDELVD-SCRAGDRIEVTGTFRSIPI--------YKTYVDVVHVKVSDRLD-IAPSIHLTN-LYLEDK- |
3 | 4joiD | 0.17 | 0.11 | 0.64 | 0.39 | HHpred | | ------------LPKPGTYYLPWEVSAG-QVPDGSTLRTFGRLCLYDMIQSRVTLMAQH-------------GSDQHQVLVCTKLVEPFHAQVGSLYIVLGELQHQQD--------RGSVVKARVLTCVE--------------------- |
4 | 1l0wA1 | 0.12 | 0.07 | 0.62 | 0.74 | DisCoVER | | -------MR--R---TH-YA-GS-LR--ET-HVGEEVVLEGWVNRRRDLGGLIFLDLRD--------R------EGLVQLVAHPYA-ER-VRPEWVVRAKGLVRLREPNPL---ATGRVEVELSALEVLA--------------------- |
5 | 1b8aA1 | 0.20 | 0.12 | 0.60 | 0.32 | MRFsearch | | ---------------------THYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDR--------------DGIVQITAPKKVDPELFKSEDVVAVEGVVNFTPKA------KLGFEILPEKIVVLNR-------------------- |
6 | 1l0wA1 | 0.11 | 0.07 | 0.65 | 0.96 | SPARKS-K | | ---------------MRRTHYAGSL---RETHVGEEVVLEGWVNRRRDLGGLIFLDLRDR--------------EGLVQLVAPAYATAERVRPEWVVRAKGLVRLR-PEPNPRLATGRVEVELSALEVLAE-------------------- |
7 | 4j15A1 | 0.13 | 0.09 | 0.73 | 0.79 | MAPalign | | ---YAKERYGISSMIDRVLVRVRDLT--I-QKADEVVWVRARVHTSRAKGKQCFLVLRQ--------------QQFNVQALVAVVKFAANINKESIVDVEGVVRKVQKIGS--CTQQDVELHVQKIYVISLA------------------- |
8 | 1ltlE2 | 0.17 | 0.11 | 0.66 | 0.61 | CEthreader | | -----------------NVIPLRELR---SKFIGKFVAVDGIVRKTDEFLDTQTLKLQEPLEN-----LSGGEQPRQITVVLEDDL-VDTLTPGDIVRVTGTLRTVRDERTKR---FKNFIYGNYTEFL---------------------- |
9 | 1wydB1 | 0.18 | 0.11 | 0.62 | 0.61 | MUSTER | | ---------------MYRSHFIADVT---PEYDGKEVIWAGWVHLLRDLGGKKFIILRD--------------KTGLGQVVVDKFGISQELTQESVIQVRGIVKADKRAP-RG-----IELHAEEITL-KAK------------------- |
10 | 1lm0A | 0.20 | 0.12 | 0.61 | 0.91 | HHsearch | | -------------SNLNLFYTPSEIVNGKTDEAGQRIRVGGMVTVMVRDPNHVQFAVH----DS---------LGGEILVTYDD-LLPDLFREGQGIVAQGVLGED--G----------KLAATEVLA--KHD------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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