>PF03821 (234 residues) HVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLIAMLFIISLSLLIGVVKN REKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRSGPSKVPLMTLQLLDFCLS ILTLCSSYMEVPTYLNFKSMNHMNYLPSQEGMSHDQFIKMMIIFSIAFITVLIFKVYMFK CVWRCYRFIKCLNSAEERSNSKMLQKVVLPSYEEALSLPSKAPEGGPAPPPYSE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | HVIMSVLLFIEHSVEVAHGKASCKLSQMGYLRIADLISSFLLIAMLFIISLSLLIGVVKNREKYLLPFLSLQIMDYLLCLLTLLGSYIELPAYLKLASRSRSGPSKVPLMTLQLLDFCLSILTLCSSYMEVPTYLNFKSMNHMNYLPSQEGMSHDQFIKMMIIFSIAFITVLIFKVYMFKCVWRCYRFIKCLNSAEERSNSKMLQKVVLPSYEEALSLPSKAPEGGPAPPPYSE | |||||||||||||||||||
1 | 5tqqA1 | 0.06 | 0.05 | 0.78 | 0.59 | DisCoVER | ----WTVYPVALVSFSSGFSQSGGSGIKNFAKAVGLTCTLASGSTIFLPEIFFFVALGAICGVASCAYLSALAALVLASVTYPPGAG-RFM--A----------------SRLSMREYLDSLLDHNSWANLWFEWYHFTIFGTLAFFLLATTIP--MP--A--GYFMPIFIFGAPGGYALAGAAAFSGA---------VT--HSISTAAFVHALPV----------LMAVLAN- | |||||||||||||
2 | 4a01A | 0.12 | 0.10 | 0.80 | 0.83 | DEthreader | -FLEYSLVSGFLGIVMGFLLANGLLVLYIAII-YGGGSSMALFGRVGGGIYTKAADVGADVGKEDVDN-GDN-GDIGM-DLGSYAESSCAALVVMLYIALPTSWLFVAVGLWAGLIIGFVT-EYYTSNAY----------------------SVSAGVAALGMLST-IATGLAIDAYGPISDNAGGIAEMAGMSHRR---RFNLKPDYAT-V-KISTDASK------------- | |||||||||||||
3 | 6wvgA | 0.08 | 0.08 | 0.99 | 0.46 | CEthreader | FWICGCCILGFGIYLLIHNNFGVLFHNLPSL--TLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKDSIHRYHSDNSTKAAWDSIQSFLQ-CCGIAGTSDWTSGPPASCPSDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNSQIDKTSNSHNVYITADKQKNGIKANFKIRHNVEDGSVQLADHYQQ | |||||||||||||
4 | 1jb0A2 | 0.06 | 0.06 | 0.96 | 0.63 | EigenThreader | ---------SLKEILEAHKGPFTGAGHKGWHAQLAINLAMMGSLSIIVAQHMYAMPPYPYLATDYPTQLSLFTHHMWIGGFLVVGGAAHGAIFMVRDFGRPQDMFSDTGADFMVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFQVSGWDHVFLGLFWMYNCISVVIFHFSWKMQSDVQVIGSYGSALSAYGLLFLGAHFIWAFSLMFLFSLSIIQGRAVGVAHYL | |||||||||||||
5 | 6wvgA | 0.11 | 0.10 | 0.93 | 0.38 | HHpred | -WICGCCILGFGIYLLIHNNFGVLFHNLPS--LTLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAKGTIHRYHSDNSTKAAWDSIQSFLQCCGIA----GTSDWTS-----GPPAYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNSQ-IDKNSHNVYADKQKNVEDGSVQ-LADHQQNTPI-GDGPV-LLPDN- | |||||||||||||
6 | 6wvgA | 0.09 | 0.09 | 0.92 | 0.40 | MRFsearch | --ICGCCILGFGIYLLIHNNFGVLFH--NLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKSLLMSFFILLLIILLAEVTLAILLFVYEQKLNEYVAK---------GLTDSIHRYAWDSIQSFLQCCGIAGTSDWTSG-----PPASAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNSQIDKTSNSHNVYITADKQKNGIKVQLADHYQQNTPIGDGPVLLPDNHY | |||||||||||||
7 | 6nf4A2 | 0.08 | 0.06 | 0.74 | 0.74 | FFAS-3D | -LASSVSVLVVYLIHLEKTEEMHEAAVSMFYYYGVAMMACMCVGSGTGLLVLLLASSL-----GSWLMSWCSVVASVTSLTYSLLLVLEKCIQNLFIVESLYRPGRKRQILKNICMFLFMCNISLWILPAFGCRPQYDNPLENETFG---------TSVWTTVLNVAIPLNLFYRMHSVASLFEVFR----------------------------------------------- | |||||||||||||
8 | 6uebA | 0.12 | 0.12 | 0.98 | 0.76 | SPARKS-K | SHHIGSAQGLLYSILVAIH-DSGYNDGTIFPVSPRDYLRGLARGVLIGSSICFLTRMTNININRPLELVSGVISYILLRLDPSLYIMLREPSLRGEIFSIPKIPAAYPTTMKEGNRSILCYLQHVLRYEREIITAS---PENDWLWIFSDFRSAKMTYLSLITYQSHLLLLSKSMRDNLRQLSSLMRQVLGGHGEDTLESDDSLRRTRWVDQEHAARTGDYSPNKKVSRKVGCS | |||||||||||||
9 | 3rkoC | 0.08 | 0.05 | 0.62 | 0.97 | CNFpred | --LLMLGFFIAFAVKMPV-----------HGWLPDAHSQAPTAGSVDLAGILLKTAAYGLL--RFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQ-----TDIKRLIAYTSVSHMGFVLIAIYTG------------------------SQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRD-------------------------------------------- | |||||||||||||
10 | 6w1wA | 0.03 | 0.02 | 0.63 | 0.83 | DEthreader | YDATCNSL--FI--G---HVAKDPN--WLVEVRSRTEILRAVMNEFMQQKPKIFAQIITSNITLTNEAQQVFTKSYNQAKNAEELLASSIQDGWNEL--------------------------------------------------A-SEEQAMRIATIKAIIQTLSNMSE-EFLKIDDSLPALSLLWQDELDKVNELINALQSGSDP------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |