Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | FLSTVLKVMYLSFVRNARFVSPTTLPGINFMRRSLAEMFTLDTECSYQHAFLYIRQLAIHLRNAVTLKRKESYQAVYNWQFVNALKLWGDVLGATVNSELSALIYPLVTIIQGVIKLIPTAQWFPLRFHCIRVLINLTKSTRIFIPVLPFILEILQSATFNKKHTQISLNAMPFTCILRCTRPQLEELSSRTQVTENIFSTALEYLAAESYSLTFPDLVVPAIVNLKQYLKTCQVAATSRKLKQLLDLIIDNSRIIEAERMKINFSLRDAALIQSWETQMENNGTPLLTFYTNW |
1 | 5wlcST | 0.10 | 0.09 | 0.85 | 1.17 | DEthreader | | KLGKFTAVLLRHIIFLSNQNYLKFKRTQNALISILKSLSEKYNRELSEECRDYINEMQARYKKNH-F----D--AL-SNGDLVFFSIIGILF-STSDQ-YHLVITPALILMSQFLQIKFNSLKIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFLGLPLDVD--KRSTIIPLSTMDTEAH-PV-DQCVSVLLNVMESLDATISTVWKS--LPAFNEIILPIQQLLSAYSKYSDF-EKPRNILNKVEKLTKFTEH-IP-LALQNHK------------------------- |
2 | 5wlcST | 0.08 | 0.07 | 0.86 | 1.17 | DEthreader | | KLGKFTAVLLRHIIFLSNQNYLKSFKTQNALISILKSLS-EK--YNRELSEECRDYINEMQARYKKNH-F--D--ALSNGDLVFFSIIGILF--STSDQYHLVITPALILMSQFLQIKFSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVGLPLDVDFTKRSTIIPLHLSDTEAHPV-DQCVSVLLNVMESLDATISTVWKSL-PAF-NEIILPIQQLLSAYTKYSDF-EKPRNILNKVEKLTKFTEH-IP-LALQNHK------------------------- |
3 | 3ea5B2 | 0.08 | 0.05 | 0.69 | 1.10 | DisCoVER | | -GKGFESPYLLKAL-NQVDSPV----SI-TAVGFIADISNSLEEDFRRYSDAMMNVLAQMIS----------NPNARRELKPAVLSVFGDIASNIGA-DFIPYLNDIMALCVAAQNTKPLDYQIKVLEAVLDAYVGIVAGLHALYVIFQFIAQVA------------------EDPQL-------------YSEDATSRAAV-GLIGDIAAMFGIKQFYGWVIDYIKRTR--SGQLFSQATKDTAR-WAREQQKRQ---L---------------------------------- |
4 | 5wlcST | 0.09 | 0.09 | 0.94 | 1.03 | MAPalign | | -LGKFTAVLLRHIIFLSNKNVQSFKRTQNALISILKSLS----EKYNRELSEECRDYINEMQARYKK----NHFDALSNGDLVFFSIIGILFT--SDQYH-LVITPALILMSQFLEIKFSLKRIAFGAVLVRIVSQYQRISKRYIEVVYFFQKILLTFLGLPLDVDFTKKRSTIIPLHLSTMDTEHPVDQCVSVLLNVMESLDATISTWKSLPAFNEIILPIQQLLSAYTSKYSD---FEKPRNILNKVEKLTKFTHIPLDKKSYDPDRTRSEINKMKAQLKKERKFTMKEI-- |
5 | 5wlcST | 0.12 | 0.11 | 0.94 | 1.24 | HHsearch | | FTAVLLR--HIIFLSNQNYNVQSFKRTQNALISILKSLSEKYNRELSEECRDYINEMQARYKKNH--------FDALSNGDLVFFSIIGILFSTS--DQYHLVITPALILMSQFLEQINSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVEPLDFEIRSTIIPLHTLSTMD-TEAHPVDQCVSVLLNVMESLDATITVWKSLPAFNEIILPIQQLLSAYT--SKYSDFEK-PRNILNKVEKLTKFT--EHIPLALQNHKPVSIPTHAPKYEENFNPDKKEINKM |
6 | 5wlcST | 0.11 | 0.11 | 0.96 | 1.00 | FFAS-3D | | FTAVLLRHIIFLSNQNYLKNVQSFKRTQNALISILKSLSEKYNRELSEE----CRDYINEMQARYKKNHFD----ALSNGDLVFFSIIGILF--STSDQYHLVITPALILMSQFLEQFNSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVEPLDTKKRSTIIPLHTLSTMDTEAHPVDQCVSVLLNVMESLDATISTVWKSLPAFNEIILPIQQLLSAYTSKYSDAQLKKERKFTMKEIRKDAKFEARQREKNKESSDYHAKMAHIVNTINTEEGAEKNKYER- |
7 | 5wlcST | 0.08 | 0.07 | 0.85 | 1.17 | DEthreader | | KLGKFTAVLLRHIIFLSNQNYKNFKRTQNALISILKSLS-EK--YNRELSEECRDYINEMQARYKKNH----FD-ALSNGDLVFFSIIGILF--STSDQYHLVITPALILMSQFLEQIKFLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVYGLPLDVDRSTIIPLHTSTMDTEA-HPVDQCVSVLLNVMESLDATISTVW-KSL-PAFNEIILPIQQLLSAYSKYSDF-EKPRNILNKVEKLTKFTE--HIPLALQ---------------------------- |
8 | 6fvbA | 0.08 | 0.06 | 0.79 | 1.00 | DEthreader | | DKASIRGRLFE--IDE--Q----NNQLCIQNAQASARIARLDFVEWPTLFEDLENLLNDEI-IR-------K--DSVKIYNILHINQIVKVLGTARRCPAQSKVPLILPLIVRIYLQSEWTSSLQVSYLALKVLRRIICEGYDPVCFIKLSVSHFELSNHENF----------------------K-K--FDIYEKFIKCLGKLYFNLVTGSANFILLSTQILITYTRLIFDKAPKEFWEQTAIRGLLILKRVINFIHKK-GRSDKLTI------------------SYEYQI- |
9 | 4k6jA | 0.11 | 0.09 | 0.81 | 1.00 | DEthreader | | LDRASLDLMIRLLELE-Q-LENITHLAMETLLSLTDWFKEELR-LL-GGLDHIVDKVKECVDHLSRDEDEEKL-VASLWGAERCLRVLESVTVHNPEQSYIAYKSQLIVSSAKALQHCLINGVEDCMRAIIGVLLNLTNDNEGSTGLIGTALNCVLQVPK-Y----------------------L----PQ-EQRFDIRVLGLGLLINLVEYSANRHCLVMAVQALVQLFLERERAAEDCIVASYTALLLGCLCQESPI--------------------TGQKSISRVIE---- |
10 | 1vt4I | 0.15 | 0.14 | 0.92 | 1.08 | HHsearch | | FVEEVLRINYKFLMSPIRQPS--------MMTRMYIRLYNDNQVFAKLQPYLKLRQALLELRPAKNVKVQCNL-KNCNSPETVLMLLYQID--PNWTSNIKLRIHSLSIIAESIRDGLATWDVNCDKLTTIIELNVLSFPPSAHIPTILLSLIWFDVIKLHKQPKENIPKTFDSDLIPPYLDQYFYSHIERMTLFRMVDFRFLEQKIRHDSTAWNASGSLNTLQQLKFYKPYCDNPKYVNAILDFLPKIEE-----------NLICSKYTDLLRI-ALMAE-DEAIFEEAHKQV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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