>PF03715 (294 residues) FLSTVLKVMYLSFVRNARFVSPTTLPGINFMRRSLAEMFTLDTECSYQHAFLYIRQLAIH LRNAVTLKRKESYQAVYNWQFVNALKLWGDVLGATVNSELSALIYPLVTIIQGVIKLIPT AQWFPLRFHCIRVLINLTKSTRIFIPVLPFILEILQSATFNKKHTQISLNAMPFTCILRC TRPQLEELSSRTQVTENIFSTALEYLAAESYSLTFPDLVVPAIVNLKQYLKTCQVAATSR KLKQLLDLIIDNSRIIEAERMKINFSLRDAALIQSWETQMENNGTPLLTFYTNW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | FLSTVLKVMYLSFVRNARFVSPTTLPGINFMRRSLAEMFTLDTECSYQHAFLYIRQLAIHLRNAVTLKRKESYQAVYNWQFVNALKLWGDVLGATVNSELSALIYPLVTIIQGVIKLIPTAQWFPLRFHCIRVLINLTKSTRIFIPVLPFILEILQSATFNKKHTQISLNAMPFTCILRCTRPQLEELSSRTQVTENIFSTALEYLAAESYSLTFPDLVVPAIVNLKQYLKTCQVAATSRKLKQLLDLIIDNSRIIEAERMKINFSLRDAALIQSWETQMENNGTPLLTFYTNW | |||||||||||||||||||
1 | 5wlcST | 0.10 | 0.09 | 0.85 | 1.17 | DEthreader | KLGKFTAVLLRHIIFLSNQNYLKFKRTQNALISILKSLSEKYNRELSEECRDYINEMQARYKKNH-F----D--AL-SNGDLVFFSIIGILF-STSDQ-YHLVITPALILMSQFLQIKFNSLKIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFLGLPLDVD--KRSTIIPLSTMDTEAH-PV-DQCVSVLLNVMESLDATISTVWKS--LPAFNEIILPIQQLLSAYSKYSDF-EKPRNILNKVEKLTKFTEH-IP-LALQNHK------------------------- | |||||||||||||
2 | 5wlcST | 0.08 | 0.07 | 0.86 | 1.17 | DEthreader | KLGKFTAVLLRHIIFLSNQNYLKSFKTQNALISILKSLS-EK--YNRELSEECRDYINEMQARYKKNH-F--D--ALSNGDLVFFSIIGILF--STSDQYHLVITPALILMSQFLQIKFSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVGLPLDVDFTKRSTIIPLHLSDTEAHPV-DQCVSVLLNVMESLDATISTVWKSL-PAF-NEIILPIQQLLSAYTKYSDF-EKPRNILNKVEKLTKFTEH-IP-LALQNHK------------------------- | |||||||||||||
3 | 3ea5B2 | 0.08 | 0.05 | 0.69 | 1.10 | DisCoVER | -GKGFESPYLLKAL-NQVDSPV----SI-TAVGFIADISNSLEEDFRRYSDAMMNVLAQMIS----------NPNARRELKPAVLSVFGDIASNIGA-DFIPYLNDIMALCVAAQNTKPLDYQIKVLEAVLDAYVGIVAGLHALYVIFQFIAQVA------------------EDPQL-------------YSEDATSRAAV-GLIGDIAAMFGIKQFYGWVIDYIKRTR--SGQLFSQATKDTAR-WAREQQKRQ---L---------------------------------- | |||||||||||||
4 | 5wlcST | 0.09 | 0.09 | 0.94 | 1.03 | MAPalign | -LGKFTAVLLRHIIFLSNKNVQSFKRTQNALISILKSLS----EKYNRELSEECRDYINEMQARYKK----NHFDALSNGDLVFFSIIGILFT--SDQYH-LVITPALILMSQFLEIKFSLKRIAFGAVLVRIVSQYQRISKRYIEVVYFFQKILLTFLGLPLDVDFTKKRSTIIPLHLSTMDTEHPVDQCVSVLLNVMESLDATISTWKSLPAFNEIILPIQQLLSAYTSKYSD---FEKPRNILNKVEKLTKFTHIPLDKKSYDPDRTRSEINKMKAQLKKERKFTMKEI-- | |||||||||||||
5 | 5wlcST | 0.12 | 0.11 | 0.94 | 1.24 | HHsearch | FTAVLLR--HIIFLSNQNYNVQSFKRTQNALISILKSLSEKYNRELSEECRDYINEMQARYKKNH--------FDALSNGDLVFFSIIGILFSTS--DQYHLVITPALILMSQFLEQINSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVEPLDFEIRSTIIPLHTLSTMD-TEAHPVDQCVSVLLNVMESLDATITVWKSLPAFNEIILPIQQLLSAYT--SKYSDFEK-PRNILNKVEKLTKFT--EHIPLALQNHKPVSIPTHAPKYEENFNPDKKEINKM | |||||||||||||
6 | 5wlcST | 0.11 | 0.11 | 0.96 | 1.00 | FFAS-3D | FTAVLLRHIIFLSNQNYLKNVQSFKRTQNALISILKSLSEKYNRELSEE----CRDYINEMQARYKKNHFD----ALSNGDLVFFSIIGILF--STSDQYHLVITPALILMSQFLEQFNSLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVEPLDTKKRSTIIPLHTLSTMDTEAHPVDQCVSVLLNVMESLDATISTVWKSLPAFNEIILPIQQLLSAYTSKYSDAQLKKERKFTMKEIRKDAKFEARQREKNKESSDYHAKMAHIVNTINTEEGAEKNKYER- | |||||||||||||
7 | 5wlcST | 0.08 | 0.07 | 0.85 | 1.17 | DEthreader | KLGKFTAVLLRHIIFLSNQNYKNFKRTQNALISILKSLS-EK--YNRELSEECRDYINEMQARYKKNH----FD-ALSNGDLVFFSIIGILF--STSDQYHLVITPALILMSQFLEQIKFLKRIAFGAVLVRIVSQYQRISKRYIPVVYFFQKILLTFIVYGLPLDVDRSTIIPLHTSTMDTEA-HPVDQCVSVLLNVMESLDATISTVW-KSL-PAFNEIILPIQQLLSAYSKYSDF-EKPRNILNKVEKLTKFTE--HIPLALQ---------------------------- | |||||||||||||
8 | 6fvbA | 0.08 | 0.06 | 0.79 | 1.00 | DEthreader | DKASIRGRLFE--IDE--Q----NNQLCIQNAQASARIARLDFVEWPTLFEDLENLLNDEI-IR-------K--DSVKIYNILHINQIVKVLGTARRCPAQSKVPLILPLIVRIYLQSEWTSSLQVSYLALKVLRRIICEGYDPVCFIKLSVSHFELSNHENF----------------------K-K--FDIYEKFIKCLGKLYFNLVTGSANFILLSTQILITYTRLIFDKAPKEFWEQTAIRGLLILKRVINFIHKK-GRSDKLTI------------------SYEYQI- | |||||||||||||
9 | 4k6jA | 0.11 | 0.09 | 0.81 | 1.00 | DEthreader | LDRASLDLMIRLLELE-Q-LENITHLAMETLLSLTDWFKEELR-LL-GGLDHIVDKVKECVDHLSRDEDEEKL-VASLWGAERCLRVLESVTVHNPEQSYIAYKSQLIVSSAKALQHCLINGVEDCMRAIIGVLLNLTNDNEGSTGLIGTALNCVLQVPK-Y----------------------L----PQ-EQRFDIRVLGLGLLINLVEYSANRHCLVMAVQALVQLFLERERAAEDCIVASYTALLLGCLCQESPI--------------------TGQKSISRVIE---- | |||||||||||||
10 | 1vt4I | 0.15 | 0.14 | 0.92 | 1.08 | HHsearch | FVEEVLRINYKFLMSPIRQPS--------MMTRMYIRLYNDNQVFAKLQPYLKLRQALLELRPAKNVKVQCNL-KNCNSPETVLMLLYQID--PNWTSNIKLRIHSLSIIAESIRDGLATWDVNCDKLTTIIELNVLSFPPSAHIPTILLSLIWFDVIKLHKQPKENIPKTFDSDLIPPYLDQYFYSHIERMTLFRMVDFRFLEQKIRHDSTAWNASGSLNTLQQLKFYKPYCDNPKYVNAILDFLPKIEE-----------NLICSKYTDLLRI-ALMAE-DEAIFEEAHKQV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |