Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| Seq | WLGIVVSAVCLWIALRGLDFQTFWQVMRQANYWWLVPGVGVYFLAVWARTWRWHYMLRHLAPVPVSRLFPIVVIGYMGNNVYPARAGEVLRSYVLKRKENVPISASLATVVLERLFDGLVMLLFVFVTLPFAPLPPVYSSLVTILSLLFLTALAAFLALAARPTHMSRAYAWIVDRFVPERFRATVHGLFDRFVEGLQSLRSPRDLALIFMSSTLIWLTETGKYWFVMHAFPFETSFLVLMLMTAVVNLFTTLPSTPGYIGTFHVPGIAVLMAFNVDQAVATSYTVVLHVALWLPITTLG |
1 | 3m71A | 0.09 | 0.08 | 0.89 | 1.16 | FFAS-3D | | YFGIPLGLAALSLAWFHLEARMVSDVLGIVASAVWILFILMYAYFIALIPITTMLVGDILYRWNPLIAEVLIWIGTIGQLLF-----STLRVSELWQGGVFEQKSTHPSFYLP----AVAANFTSASSLALLGYHDLGYLFFGAGMIAWIIFEPVLLQHLRISSLEPQFRATMGI---------VLAPAFVCVSAYLSINHGEVDTLAKILWGYGFLQL-FFLLRLFPWIVEKGLNIGLWAFSFGLASMAN--------------SATAFYHGNVLQGVSIFAFVFSNVMIGLLVLMTI- |
2 | 3rkoB | 0.06 | 0.06 | 0.93 | 1.31 | CNFpred | | FAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIAMKAFVVTRVGDVFLAFALFILGTLNFREMVEL-MLMWATLMLLGGAVGKSAQQTWLADAM--AGPTPVSALIHAATMVTAGVYLIARTHGLFLM----TPEVLHLVGIVGAVTLLLAGFAALV---QTDIKRVLAYS---------TMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHE-SIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIV |
3 | 6yofA | 0.11 | 0.07 | 0.63 | 0.64 | DisCoVER | | -----------------------------TFFGQP-LGLSTLFMTEMWERFSYYGMRAIYFLISTGDLHITRATAASIMAIYASM----------------------------------VYLSGTIGGFVADRI--IG--AR-PAVFWGGVLIMLGHIVLALASALFGSIILIIIGFL----IFVFGINLGAFIAPLIVGQYHVAFSLAAIGMFIGLLVYYGGKKT---LDPHY-LRPTDPLMMSMWFL-SS-SVGSALN-------------------------------AQLVTL-Y- |
4 | 1lkxC | 0.06 | 0.05 | 0.74 | 0.83 | DEthreader | | -T-RHKSDNIYTYIVIKYEMPPAANDAYRSMRQENQCVMLKYME-KIT-NYLLEKSRALKALYLNWLVS-----LDI-Y----GF--EV--F----------QN--NSFEQLNINFCNEKLQQLFIELLKSEQEEVR------PIELIEKKGISLLDEACLITTFLDSICKQFEKNPHLQSYSICFRTYDVRGFLDKNKDTPETAGSQFRNAMNALITTLLA--CSPH---------------Y--VR-CIK-NDNKAV-QVLGLLENVRVRAGFAGRNP-------------------- |
5 | 3b9zA | 0.08 | 0.07 | 0.87 | 0.41 | CEthreader | | ---------------------EINEARLVAQYNYSINILAMLLVGFGFLMVFVRRY--------GFSATTGTYLVVATGLPLYILLRANGIFGHALTPHSVDAVIYAEFAVATGLIAMGAVLGR----------LRVFQYALLALFIVPVYLLNEWLVLDNASGLTEGFQDSAGSIAIHAFGAYFGLGVSIALTTAAQRAQPIESDATSDRFSMLGSMVLWLFWPSFATAIVPFEQMPQTIVNTLLALCGATLATYFLSNAALAGGVAIGSVCNIVGPVGAFVIGLLGGAISVVGFVFIQ |
6 | 2ynjA | 0.09 | 0.07 | 0.81 | 0.70 | EigenThreader | | DKFENMGAQMVKEVASGDGTTTATVLAQAIITEGLKAVMDLKRGIDKAVTAAVEELKALSVPCSD----------------------SKAIAQVGTISANSDETVGKLIAEAMDKVGPVLEA----------VAKGEALATLVVNTMRGRKAMLQDIATLTGGTVIQGRVAQIRQEATSDYDREKLQERVAKLADALHATRAAVEEVALIRVASKLAEDQNVGIKVALRAME-------------APLRQIVLNCGEEPSVVANTVKGGKVTRS----ALQYAASVAGLMIT-------T |
7 | 3kbcA | 0.12 | 0.11 | 0.91 | 0.37 | HHpred | | -LCMLVMPIVFVVGAASISPARLG----RVGVKIVVYYL-LTSAFAVTLGIIMARLFNPGAHLAVGGQHQAPPLVHILLDIVPTNPGQVLPGIYLMNSSAEDAINGLAE-AMYKIVNGVQYAPIGVFALIAYEQVHVVGELAVTAAGLTLQILLFVLLKIYGIDPISFIKHAKDFGTLPVT------------MRVAKEMGSEGIFTLPLGATIGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASGTAGVPGA-GA--IMLCMVLHSVGLPLTDAYAMIGIDAGRTMVNV---- |
8 | 6w4sF | 0.09 | 0.09 | 0.98 | 0.33 | MRFsearch | | --AVYGLVVAGSVLVLGAIIGDWVDKNA--RLKVAQTSLVVQNVSVILCGIILMMVFLHKHMYHGWVLTSCYILIITIANIANTATAITIQRDWIVVVAGEDRSKLANMNATIRRIDQLTNILAPMAVGQIMTFGSPVIGCGFISGWNLVSMCVEYVLLWKVYPFRTFRDGWVSYYNQPVFLAGMGLAFLYMTVLGFDCITSGSILSILMGASAITGIMGTVAFTWLRRKCGLVRTGLISGLAQLSCLILCVISVFMPIISVSLLFAGVIAARIGLWNGVQNSMNYLLDLLHFIMVILA- |
9 | 6ob6A | 0.12 | 0.11 | 0.97 | 1.14 | FFAS-3D | | -IFFMLGLGTLLFFMTATQYAIFNNVMTLCAMLPLLLFTYLILGSLVAILLVFLITAILVKQLDALPFFVITMIKIVLINSFGAILQGSLFGLAGL----FPASYTAAIMSGQGLAGFFASVAMICAIA---SGSELSESAFGYFITACAVIILTIICYLGLPRLEFYRYYQQSIKAILKKISVLAFSVCFIFTITIGMFRYFIPVSCFLTFNIFDWLGRSLTAVFMWPGKDSRWLPSLVLARLVFVPLLLLCNIKPRRFAFSNGYLASLCMCFGVKPAEAETAGAIM-AFFLCLGLALG |
10 | 6cc4A | 0.08 | 0.08 | 0.96 | 0.96 | SPARKS-K | | GLLTLALAVVTVAGMLAAPIMVTAPGFADFALTSQLLKITFPYILLISLASLVGAILNTWNR--FSIPAFAPTLLNISMIGFALFAA---------PYFNPPVLALAWAVTVGGVLQLVYQLPHLKKIGMLVLPRINFGPAILGVSVSQISLIINTIFASFLASWMYYADRLMEFPSLGVALGTILLPSLSKSFAEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGLMTQRALIAYSVGLIGLIVVKTPVKIAIVTLILTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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