>PF03690 (320 residues) KIGTHNGTFHCDEVLACFFLRQLPEYSDGEIVRTRDPAQLAECDIVVDVGGEFDPKRHRY DHHQRTFSDTFNSLCPEKPWVTKLSSAGLVYLHFGRRVLSQLTQLKEDDRQLEVLYDKLY ENFVEEVDAVDNGISQYDGESRYSISTTLSARVSHLNPRWNSTDQDTEEGFKKALKMVGE EFLDRLDFYKSSWLPAREVVEEAVKKRHQIDPSGEVLLFSQGGCPWKEHLFALEKELHVE TPIKFVLYPDQNGQWRVQCVPAGLNTFQNRLSLPEEWRGVRDEALSELSGIKGCIFVHAG GFIGGNKTQEGALEMARRTL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KIGTHNGTFHCDEVLACFFLRQLPEYSDGEIVRTRDPAQLAECDIVVDVGGEFDPKRHRYDHHQRTFSDTFNSLCPEKPWVTKLSSAGLVYLHFGRRVLSQLTQLKEDDRQLEVLYDKLYENFVEEVDAVDNGISQYDGESRYSISTTLSARVSHLNPRWNSTDQDTEEGFKKALKMVGEEFLDRLDFYKSSWLPAREVVEEAVKKRHQIDPSGEVLLFSQGGCPWKEHLFALEKELHVETPIKFVLYPDQNGQWRVQCVPAGLNTFQNRLSLPEEWRGVRDEALSELSGIKGCIFVHAGGFIGGNKTQEGALEMARRTL | |||||||||||||||||||
1 | 7d62A1 | 0.19 | 0.06 | 0.32 | 1.50 | HHpred | RLVTR---SDFDGLVCAVLLKSI--ELIDDIQFVHPKDMITERDIITNLPYV-ANAHLVFDHHHRPNHII---------NPNAPSAARVVWEHYGGTK--TF--------------PFEWVEMMEAVDKGDSAQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
2 | 6mtzA | 0.12 | 0.10 | 0.83 | 1.13 | MAPalign | YHLSHI---DLDGYACQLVSKQFFKN--IQCYNANVSARIYEIILVSDLNYLKNIQIQLLDH---HISGKEVAESFHWYFLDTRCATKIVYEFLKKHYAILE------PKNTTWLEP-----LVEMVNSVDIWDGY------GFELGKCMRMITQSSE--LNRFMFDDENRDYKLKLLEELFRLKKIAGDPDNISSNAQTHLLSDCS--VYQDKKGFLSYSMGG-ISVLANLFLTQN---PDFDFYIDVNAKGNVSLRAN--------GNCDV----C----ELSQMC-----FNGGGHRNASGGKINYRDIKEQIEEIF | |||||||||||||
3 | 3cfrA | 0.08 | 0.06 | 0.74 | 0.83 | DEthreader | FDIEVTSPFP-PAI-AIT-HYDSIDDRFYVFDLLNSPDNEKELEYLVYNRIKNGESTAKRL------RVKVIE----NMYGSRE---II--TLF-GISV----------------L--DYIDLYKK----------------TNQPSYSLDYSEGKLKYDGLSNQRYISYNIIDVYRVLQIDAQFINLSLDMGYYATW-IISPIRNISTYSCMMYVPITFNRKKAINGLAGALGFRYYDLRNATAI------------T---------TFGQMALQWIERKVNEYLNE-------FVLYGDTDSIEPIDRGFREMCEYMN | |||||||||||||
4 | 3cfrA | 0.07 | 0.06 | 0.75 | 0.83 | DEthreader | FDIEVTSPFP-P-I-AIT-HYDSIDDRFYVFDLNSPYDNEKELMYLDYVYNRKGESTAKRL-----RVKVIE------NMYGSRE--II--TLF-GISV----------------LD-YIDLYKK---------------FTNQPSYSLDYISEGKLKYDGLSNHQRISYNIIDVYRVLQIDARQFINLSLDMGYAPTWIISPIRQNSTIYSCSMYPTFNRKKKAINGLAGALGNFRYYDRNATA-------------IT--------TFGQMALQWIERKVNEYLNE------FVLYGDTDSIYMEPDRGFREMCEYMN | |||||||||||||
5 | 7d62A | 0.14 | 0.12 | 0.82 | 0.68 | HHpred | RLVTRSD---FDGLVCAVLLKSI--ELIDDIQFV-HPKDMTERDIITNLP--YVANALVFDHHHRPN-HII--------NPNAPSAARVVWEHYGGTK--TF-P-------------FEWVEMMEAVDKGDSAQFTRD---EVLDSTGWNLLNFLMDARTGLGNRISNNLMMALIDHCTHILLPDVKERVELYRKHETLFKEQIQRCGK--VYQNLVLLDLTEIAGNRIIYAL------YPQCNISKMWGFKQNIVFATGK-SI--F-DRSS------RTNIGELMLKYG--GGGHAAAGTCQIAIEDADRVEKALITQ- | |||||||||||||
6 | 7d62A | 0.09 | 0.07 | 0.82 | 0.94 | DisCoVER | YRLVTR--SDFDGLVCAVLLKSI-EL-IDDIQFVHPKDMQITERDIITNL-PYVANAHLVFDHHHPNHIIN---------PNAPSAARVVWEHY--GGTKTF--------------PFEWVEMMEAVDK-GDS-AQFTRDEVLDGWNLLNFLMDARTGLGNF-RISNYNLMMALIDHCTSIDEILKERVELYRKHETLFKEQIQRCGK-VY--QNLVLLDLIYAGNRFIIYAL-----Y-PQCNISIHKMWGNIVFATGKS----IFDRSSRTN--IGEL----M-----LKYGGGGHAAAGTCQIAIAKALITQINAD- | |||||||||||||
7 | 7d62A | 0.13 | 0.11 | 0.83 | 0.50 | MRFsearch | RLVTRS---DFDGLVCAVLLKSIEL--IDDIQFV-HPKDMQERDIITNLPYVA-NAHLVFDHHHRPNHIIN---------PNAPSAARVVWEHYGGT----------------KTFPFEWVEMMEAVDKGDSAQFTRDEVL-DSTGWNLLNFLMDARTGLGNFRISNYNLMMALIDHCTPDVKERVELYRK----HETLFKEQIQRCGKV--YQNLVLLDLEEETIYAGNRFIIYALYPQCNISIHKMWGFKQNIVFATG------------KSIFDRSTNIGELMLKYGG--GGHAAAGTCQIAIEDADRVEKALITQI | |||||||||||||
8 | 7d62A | 0.14 | 0.11 | 0.81 | 0.81 | SPARKS-K | RLVTRS---DFDGLVCAVLLKSIELIDDIQFV---HPKDITERDIITNLPYV---ANAHFDHH----HRPNHIINPNAP-----SAARVVWEHY------------GGTKTFP----FEWVEMMEAVDKGDSAQFTRDEVLDSTG-WNLLNFLMDARTGLGNFRISNYNLMMALIDHCIDEILPDVKERVELYRKHETLFKEQIQRCGKVYQNLVLLDLTTIYAGNRFIIYALY----PQCNISIHKMWGQKQNIVFATGKSI--FDRSSTNLMLKYGGIAIEDADRVEKALITQINADG-------------------- | |||||||||||||
9 | 5ghrA | 0.09 | 0.08 | 0.89 | 1.11 | MAPalign | RLISHR---DADGITAGAILAKAREGGTFQLSIVKQVELIDQLYVFSDLSGIEFATVVVADHHPPE---KDSFSTDSHVLPRDLSGSGVAYFVAAIVGAEIDGTFHGLNLEIIEDGKELKEAIDRLIGDVVISPLYPEGDVRHEARE-FATLLNATG---------RLNAGTLGVAICLGDEEAYKVARLDDYKKEQIEARKFIIQWNVEGEHAYVFYAGKNIRTLVGIAANAI------NAPVVVLADSDENLVKGSARTTEKALYHLGEAL--------KEVAE----KLGGEGGGHAAAGIRFPKIDEFIKLFNEAL | |||||||||||||
10 | 6cc2A | 0.08 | 0.08 | 1.00 | 0.77 | CEthreader | KTIQLYVSPTVDAIVCYKILSFEKDGLLHSAVPVNNYETLSRVFFFIDCAGSIDIFVYIIDSHRPFNKLTSNEYVDSDGEFYSESVGRVALAIAKKLNKVENDAIQYFIDNLQLETLEITDLLQTVKTPCVKDFLPSFFKKFGDYSISAFDAAHAIGSTNDEPDQNWQQQFWEGFKLLSSPYDFGFAKCIESNKNLVETGIILLLSGSCFNEANKYRFCSVSDELLSIRFKTPYKALQLAQFLAEASSRRYKKWLPFILAVLDAEKTFVIVGYSSPISVKTLNYFGAKFTQTAISILQKSFDSFVTEIHRENLVKYKKAL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |