>PF03687 (329 residues) AARATTLRSRGGVVSSRASGGTLVVTAQKPKVMARNDVDYRPLSLQAGGRQGSLDLVATA TADDASFFEANAAGSATIPRMTLAFFHTMRISDSHIDVLSFVGRAGRTGYGVSARAFYPD MSSKTTGFVGIFNVSHAFSSAYRFKGVSVGANLKVGYRHTRGGGSSQSKSSNGKENHHIV LTADVGVRGAWTVSKNFGAHEPNLWAGVAFRNIGASINATNLHGNNGAGGSGGGGGGNGD GKPAHVTDSRVILALAYQPVRYFLFGAGLEWLYNVGSIKAVNSLRYGAAFMLFPLRQLAF SSSVVMKGMGPQQVRASAGAEVQFSHVRC |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | AARATTLRSRGGVVSSRASGGTLVVTAQKPKVMARNDVDYRPLSLQAGGRQGSLDLVATATADDASFFEANAAGSATIPRMTLAFFHTMRISDSHIDVLSFVGRAGRTGYGVSARAFYPDMSSKTTGFVGIFNVSHAFSSAYRFKGVSVGANLKVGYRHTRGGGSSQSKSSNGKENHHIVLTADVGVRGAWTVSKNFGAHEPNLWAGVAFRNIGASINATNLHGNNGAGGSGGGGGGNGDGKPAHVTDSRVILALAYQPVRYFLFGAGLEWLYNVGSIKAVNSLRYGAAFMLFPLRQLAFSSSVVMKGMGPQQVRASAGAEVQFSHVRC | |||||||||||||||||||
1 | 6h3iF | 0.14 | 0.12 | 0.82 | 1.17 | DEthreader | ------------------------------DI--PITTGVPFLLVAADARAAGLGDQGVATSSDVFSQQWNPAKYAFADAQGLSISYTPYLTDISLGQVTYYNKINRSAFAGSFRYFGFGGIELRT-EVNPNEFALDGSYSLKSETFSMAVAARYIRSNLKVA------TEEIDASAAGSFAVDVAGFYQSEEIAYSD-FNGRWRAGFNIQNLGPKISYDH------------------DDLSANFLPANLRVGGGFDFINKLGVSLELTKLLVPPYIKGDLEITYSAAAEYMYQDAFAMRLGYYHESPMKGAKQFFSLGAGFKYSMKV | |||||||||||||
2 | 3bs0A | 0.11 | 0.09 | 0.83 | 1.17 | DEthreader | ------------------------------------------DLEGYGAISRAMGGTSSSYYTGNAALISNPATLSFADGNQFELGLDVVTTPYVGPQLSYVAQLDDWRFGAGLFVSSLGTEYGSDNSSRLIVLRAPIGFSYQATKLTFGASVDLVWTSLNLEL-HFSLSRAGGAVDAVGWGGRLGLTYKL-T--------DNTVLGAMYNFKTSVGDLEGKATLSAISGAVLPLDGDI-RVKNFEMPASLTLGLAHQFNERWVVAADIKRAYWDVMHRYQDITVASIGTAYKYNNDLTLRAGYSYAQ----KRHVTFGGEYDFDDSRI | |||||||||||||
3 | 3dwoX | 0.13 | 0.11 | 0.85 | 4.29 | HHpred | ---------------------------------------AGFMVPTTNTAGWGRAMAGGSFPNDPSAAFNNPAAMAFIDKRIAQLTVNYADIYAWLPTGFLVVPINDFAFGLSQVVPMGNWKGRDFAVTKIETIGLTGSLSFKVDNFSLGAGVIIQRTSGFVSQNLNSSALMRVKVDNTSPGFFAGAV--WKPT-------DRDTLGFAYHAKIRKLKGHYNLYDHDGGLTPGDLRMGASASARLDIPAYASLDWVHQFNDRLSLGASATWTWSSIPYTYRNTWTLAVGGDYKVTDQWTMRAGVAYDQTPPDGDRASLGAGYRFPELSI | |||||||||||||
4 | 6z34A | 0.15 | 0.12 | 0.84 | 1.09 | DisCoVER | ----------AFNLV--------G----------------------VGPVSQGMGGIGAAFNIGAQGMMLNPATLTQMEGMHLGLGMDIITGPYVAPELSLVWRGERYALGVGAFASDGVG--TLENYSRLIVLRIPFSAAYQNEKLSVGASLDAVWTSVNLGLLSAGYLSADGGVDSWGIGGRLGLTYQL---------TPKTRVGIVYNFKTHVGDLSGNADLTAVSAVGNIPLSGELKLHNFEMPASLVAGISHEFSDQFAVAFDYKRVYWVMPFNYRDTNVYSLGAQYRYGANWVFRAGVHYAQLANPTTSLSGGFSYAISYTK- | |||||||||||||
5 | 6h3iF | 0.14 | 0.12 | 0.82 | 0.47 | MRFsearch | ---------------------------------RPITTGVPFLLVAADARAAGLGDQGVATSSDVFSQQWNPAKYAFADAQGLSISYTPYLTDISLGQVTYYNKINRSAFAGSFRYFGGGIELRPTREVNPNEFALDGSYSLKLETFSMAVAARYIRSNLKVA------TEEIDASAAGSFAVDVAGFYQSEE-IAYSDFNGRWRAGFNIQNLGPKISYDHD------------------DLSANFLPANLRVGGGFDFINKLGVSLELTKLLVPFGDAELKEITYSAAAEYMYQDAFAMRLGYYHESPKGAKQFFSLGAGFKYSMIKV | |||||||||||||
6 | 6h3iF | 0.14 | 0.12 | 0.83 | 1.73 | SPARKS-K | ------------------------------DIERPITTGVPFLLVAADARAAGLGDQGVATSSDVFSQQWNPAKYAFAEDQGLSISYTPYLTDISLGQVTYYNKINDSAFAGSFRYFGFGGIELPTREVNPNEFALDGSYSLKLETFSMAVAARYIRSNLKVATEEID------ASAAGSFAVDVAGFYQSE-EIAYSDFNGRWRAGFNIQNLGPKISYDH------------------DDLSANFLPANLRVGGGFDFIFKLGVSLELTKLLVPTPKDILKEITYSAAAEYMYQDAFAMRLGYYHESPMKGAKQFSLGAGFKYSMIKV | |||||||||||||
7 | 6z34A | 0.16 | 0.13 | 0.84 | 1.05 | MAPalign | ------------------------------------------NLVGVGPVSQGMGGIGAAFNIGAQGMMLNPATLTQMEGMHLGLGMDIINGPYVAPELSLVWRGERYALGVGAFASDGVGTL--ENYSRLIVLRIPFSAAYQVEKLSVGASLDAVWTSVNLGLLELSAGYLSAGVDSWGIGGRLGLTYQL---------TPKTRVGIVYNFKTHVGDLSGNADLTAVSAVAGNIPLSGELKLHFEMPASLVAGISHEFSDQFAVAFDYKRVYWVMPFNYRDTNVYSLGAQYRYGANWVFRAGVHYAQLATPTTSLSGGFSYAFSPEDV | |||||||||||||
8 | 6z34A | 0.14 | 0.12 | 0.84 | 0.77 | CEthreader | ----------------------------------------AFNLVGVGPVSQGMGGIGAAFNIGAQGMMLNPATLTQMQGLGMDIITAELEVRNNAPELSLVWRGERYALGVGAFASDGVGTL--ENYSRLIVLRIPFSAAYQVEKLSVGASLDAVWTSVNLGLSADNHRASGGGVDSWGIGGRLGLTYQL---------TPKTRVGIVYNFKTHVGDLSGNADTAVSAVAGNIPLSGELKLHNFEMPASLVAGISHEFSDQFAVAFDYKRVYWSDPFNYRDTNVYSLGAQYRYGANWVFRAGVHYAQLANPTTSLSGGFSYAFSPEDV | |||||||||||||
9 | 6h3iF | 0.15 | 0.12 | 0.83 | 1.33 | MUSTER | ------------------------------DIERPITTGVPFLLVAADARAAGLGDQGVATSSDVFSQQWNPAKYAFAEDAGLSISYTPYLTDISLGQVTYYNKINRSAFAGSFRYFGFGGIELPTREVNPNEFALDGSYSLKLETFSMAVAARYIRSNLKVATEEIDASAA------GSFAVDVAGFYQSE-EIAYSDFNGRWRAGFNIQNLGPKISY------------------DHDDLSANFLPANLRVGGGFDFIFDLGVSLELTKLLVPTPPAELKEITYSAAAEYMYQDAFAMRLGYYHESPMKGAKFFSLGAGFKYSMIKV | |||||||||||||
10 | 3bryA | 0.13 | 0.11 | 0.82 | 4.23 | HHsearch | ----------------------------------------VFNLEGFGPVSRAMGGTGAAFDIGPAAMMENPATLGLMGEGHFSLGLDVVSTDYFAPQTAFVYRQGRYAFGAGIFAEGGQYGSRLDQFSRLLVLRVPFSAAYHVDKLTVGASVDAVWTSLNLGTLLDVGGYIDFGVQAWGIGGRLGLT--YQVT-------PDTRIGAAYQAKTHVLTGQATLSA--VGN----IPLKGDVVRNFQMPAQLTVGISHQFNDQLSVSADYQRV-FWSSQNYRDISVFGIGAEYRYNAKWTFRGGFHYAQETT---SLTGGVSYAIGNDVI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |