Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NSSDPRRPDKEIRYKPSVVNSQVQPGDDLTPDYMNILGMIFSMCGLMMRLKWCAWVALYCSCISFANSRVSDDTKQILSSFMLSISAVVMSYLQNPQPMT |
1 | 5cwqA | 0.04 | 0.03 | 0.83 | 1.00 | DEthreader | | ---------------AEALEEAKAQREVLASEKAQRVLEEARKVSEEADLALALIAIALAVLALAEVARNKEEAERAYEDARRVEEEARKVKESADEV-- |
2 | 4cofA | 0.11 | 0.10 | 0.87 | 1.17 | DEthreader | | -------------VNMMMDLRYPNIYFILQTYMPSILITILSWVSFWIYRVALGITTVLTMTTINTHLRVKAIDMYLMGCFVFVFLALLEYAFVNYIFFS |
3 | 6f0kF | 0.01 | 0.01 | 0.85 | 0.62 | DisCoVER | | QFYFSYLV--GWFCLTL-----------ALGSLFFTVAFASYFLMSLDPHWYTIFGVYFFAGSFFVAL-LGKLMFGFTAFWAYIAFSQEETLWLDCWLF- |
4 | 4abnA | 0.10 | 0.09 | 0.89 | 1.00 | DEthreader | | ----THRKDVEMVTPQEYWKGDVQTDSDEHSRHVMDSVRQAKLAVQMDLDGRSWYILGNAYLSLYFNTGQ---NPKISQQALSAYAQAEKVDR-KAS--- |
5 | 1oczC | 0.07 | 0.07 | 1.00 | 0.59 | CEthreader | | HSSLAPTPELGGCWPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLRKHMLQALFITITLGVYFTATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNH |
6 | 1oczC2 | 0.03 | 0.03 | 1.00 | 0.77 | EigenThreader | | FTGFFWAFYHSSLAPPTGIHPLNPLEVPLLNTSVLLASGVSITWAHHSLMLQALFITITLGVYFTLLQATGFHGLHVIIGSTFLIVCFFRQLKFHFTSNH |
7 | 2pffB | 0.09 | 0.08 | 0.85 | 0.33 | HHpred | | ------QGLNILEWLENP-----S--NTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLVTAVAIAETDSESFFVSVRKAITVLFFIGVRCYEAYPNT-- |
8 | 4tq3A | 0.09 | 0.06 | 0.67 | 0.35 | MRFsearch | | ---------------------------VREAWLYCIAFLALSLATAAAINEKFFLAMLGANIIGYVYSAPPWPVMDVICNALAAVLAFYAGLSI------ |
9 | 6vjaC | 0.08 | 0.05 | 0.63 | 0.59 | FFAS-3D | | ------------------------------SKTLGAVQIMNGLFHIALGGLLMLWGGIMYIISGSLLAATEKNSRKNSLSLFAAISGMILSIM------- |
10 | 3kz4B | 0.09 | 0.09 | 1.00 | 0.74 | SPARKS-K | | GHVINQLMEALMQLSRQQFPTMPVDYKRSIQRGILLLSNRLGQLVDLTRLLAYNYETLMACVTMNMQHVQTLTTEKLQLTSVTSLCMLIGNATVIPSPQT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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