>PF03659 (383 residues) VFAHVVVGNTAAHTQSTWQNDITLAHNAGIDAFALNIATPDSNTAPQVANAFAAAKALNN GFKLFFSFDYLGGGQPWPATGSNSVVSYLTQYKNSGVYFYYNGLPFASTFEGTNNINDWA PGGPIRSGAGDVYFVPDWTSLGPSGVASHSANIQGAFSWDMWPAGANDMTTTPDQQWVSA LAGKSYMMGVSPWFFHSASGGTDWVWRGDDLWAQRWQQVLQINPAFVEIVTWNDFAESHY IGPVYTTSEIAAGSSTYVNNMPHESWRDFLPYYIAMYKKSTFNISRDQMQYWYRTAPAAG GSTCGVVGNNPGWQTTMSPNSIVQDKVFFSALLMSPATVTVQIGNYAAVSYNGVQGINHW SQPFNGQTGSVKFSVVRNGATVK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | VFAHVVVGNTAAHTQSTWQNDITLAHNAGIDAFALNIATPDSNTAPQVANAFAAAKALNNGFKLFFSFDYLGGGQPWPATGSNSVVSYLTQYKNSGVYFYYNGLPFASTFEGTNNINDWAPGGPIRSGAGDVYFVPDWTSLGPSGVASHSANIQGAFSWDMWPAGANDMTTTPDQQWVSALAGKSYMMGVSPWFFHSASGGTDWVWRGDDLWAQRWQQVLQINPAFVEIVTWNDFAESHYIGPVYTTSEIAAGSSTYVNNMPHESWRDFLPYYIAMYKKSTFNISRDQMQYWYRTAPAAGGSTCGVVGNNPGWQTTMSPNSIVQDKVFFSALLMSPATVTVQIGNYAAVSYNGVQGINHWSQPFNGQTGSVKFSVVRNGATVK | |||||||||||||||||||
1 | 5uj6A | 0.08 | 0.07 | 0.81 | 1.00 | DEthreader | LGICRHQDQGPALTDEMHRRDFLLMKEMGANFIRISHY---------PQ-DDALLEMCDKGMAWEEIPIID---IVPNTGYGDNCERNLREMIRHNHPSII---TWGYMNEILLTLERTLALNRLERVLKEISTMAFHG-S-NSYNETGSKITDIVGWNLYQGWYGGDLTEKFLAQQHQNHPTHPMIVSEYGAGSDKR---FDFSIEYQKYLEHYLPVLEDTPICGGTHWNFIDFINNKGLVYADR------------TPKDVYHYYQAAWR-----------KDIPVLHIASDWTDRAG-----------------------YLPVKIYTNL---SEVELFIDGISLGKQKTE--NYTATFEVPFSRPFLFAQGNYQGKTVQ | |||||||||||||
2 | 3fn9C | 0.07 | 0.05 | 0.82 | 1.00 | DEthreader | MGVTRHQDWWGSALKEHHDFDLAAIMDVGATTVRFAH-------Y--QQ-SDYLYSRCTLGLIIWAEIPCV---NRVTGYETENAQSQLRELIRSNHPSIY---VWGLHNEVYQPHEYTAALRSLHDLAKPYTVSVNG-YGHMDHP-VNLNADIQGMNRYFGWEKKIQDIKPWVEQLEKDYPYQKLMLTEYGADANLAWGKPFYPTFQTKTHEYQWSIIKDHPIIASYLWNMFDFRNMKGL-ITFDR-----------K-TKK-DSYFWYKANWS--------E-EPVLYLTQRRNADR--------------------EK---TAVTVYSNIG--TPKVYL-NGQELSGIRNGTDVHYVFDVSLDGKNILKAVVST---EYT | |||||||||||||
3 | 4ad1A | 0.15 | 0.11 | 0.71 | 4.07 | HHpred | --FYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADK--KKIKVCFHLEPYPS--RNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLEPSEWEKLSTIRNTAYDALMIGLWTSSPTVQRPILNAHFDGFYTYFAFTYGSTPTNWVSMQKWAKE-NGKIFIPSVGPGYIDTIRPWSVIRTTDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYT---SSEFTYLDNREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
4 | 4ad1A | 0.15 | 0.11 | 0.72 | 1.06 | DisCoVER | TFCFYYDWSNFYPDPNILTKHMDMFVMARTGVLALTWWNQDETEAKRIGLILDAAD--KKKIKVCFHLEP-YPS-RNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYIEPSEWEKLITIRNTAYDALMIGLWTS-SPTVQRPFIAHFDGFYTYFAATGFTYGSTPTNWVSMQKWANGKIFIPSVGPGYIDTRIRPNGVIRTRGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAV-PYTSSEFTYLDYENREPDYYLTRTAYWVGKFRES------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 4ad1A | 0.16 | 0.11 | 0.71 | 0.83 | MRFsearch | --FYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEDETEAKRIGLILDAADKK--KIKVCFHLEP--YPSRNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYIEPSEWEKLITIRNTAYDALMIGLWTSPTVQRPFILNAHFDGFYTYFAFTYGSTPTNWVSMQKWAKEN-GKIFIPSVGPGYIDTRWNGSVIRTRDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPY---TSSEFTYLDYREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
6 | 4ad1A | 0.14 | 0.10 | 0.72 | 1.58 | SPARKS-K | IASNFYLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADKK--KIKVCFHLEPYPSRNV--QNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYIEPSEWEKLLTIRNTAYDALMIGLWTSSPTVQRPFILAHFDGFYTYFAATGFTYGSTPTNWVSMQKWAKEKIFIPSVGPGYIDTRIRPWNRTRTDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVP-YTSSEFTYLDYENREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
7 | 4ypjA | 0.09 | 0.07 | 0.82 | 1.05 | MAPalign | HGVSMHHALGAATNARGVERQMQIMKDMGVNAIRVTHN------PAS-PELLEAANKL--GLFIIEEAFDSWAQSKA----EHDIKEMVDRGKNEPAI------IMWSIGNEIYTARNLV--GWVKEIDTTRPTTIGEDKTRVSYIKEIFNIVDVVGLNYSE---------NNYDGYHKQNPSWKLYGETSSATRADLQQSSYDDYVGWGRAEDAWKYDRDLHIAGQFIWGFDYISSYFGAVDTA---------------GFPKDIFYYYQSQWKDQVVTAGEPASVRLTADRVKADG-------------------------TDLSFITADIVHLITFNVTGQGELAGVNKRKAGKALAIVQSSKLSGKITVHASVALSSDS | |||||||||||||
8 | 5ngwA | 0.14 | 0.10 | 0.71 | 0.82 | CEthreader | VGAFYKFPNYTAANTDQFPTHIRQANKAGINFFLFDLVSSQNSSFDIVARYNNELAGFDSIVKYAFNYNYINNNNPVDSTTQQDFLNIADLAENNTNYYRLDGKPVVYILNAQNLAANDSPAVFNRMRGMELYIIGMQPQWQPRYDFRFVGAVDAVTHNTYMQLNENNSDKMVYGAWSYSQENLEYIPTISPSSNYKLNNQNYIFEKNEKLFRSVCNAARGAVSKMVLLESFNNWNIGTQIEESNELK-VDGVTPAYG-----DQYLKILKEEFKVA---------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 4ad1A | 0.16 | 0.11 | 0.72 | 1.15 | MUSTER | NF-YPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADKKK--IKVCFHLEPY--PSRNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLIPSEWEKLLTIRNTAYDALMIGLWTSSPTVQRPFILAHFDGFYTYFAFTYGSTPTNWVSMQKWAKEN-GKIFIPSVGPGYIDTRIRPWNIRTRDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYTSSEFTYLDY-ENREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
10 | 4ad1A | 0.16 | 0.11 | 0.71 | 4.35 | HHsearch | SNFYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDTEAKRIGLILDAADK--KKIKVCFHLEPYP--SRNVQNLRENIVKLITRYGNHPAFYRKDGKPLFFIYDSYLEPSEWEKLSTIRNTAYDALMIGLWTSSPTQRPFILNAHFDGFYTYFAFTYGSTPTNWVSMQKWAKE-NGKIFIPSVGPGYIDTRRPWSVIRTRDGQYYDAMYRKAIEAGVSAISITSFNEWHEGSQIEPAVPYT---SSEFTYLDNREPDYYLTRTAYWVGKFRESK------------------------------------------------------------------------------------------------------ | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |