Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | GNLYDWVKALHVISIIAWMAGLLYLPRLFVYHCEAAAGSATSETLKVMERRLLRAIMNPAMIASYVFGIWMLALNPGWFQSGWIHAKLALVIGLTGVHMMMAGWRRKFAEDRNQRPQRFFRVMNEVPTLLMIGIVILVIVKPF |
1 | 6egcA | 0.10 | 0.10 | 0.94 | 1.33 | DEthreader | | --TRTEIIRELERSLREQEELAKRLKELLRELERLQGSDEDVRELLREIKELVE-EIEKLAREQKYLVEELKRQ---G-N-EIIRELERSLREQEELAKRLKELLRELERQRSVRELREIKELVEEIEKLAREQKYLVEELRQ |
2 | 6egcA | 0.10 | 0.10 | 0.94 | 1.33 | DEthreader | | --TRTEIIRELERSLREQEELAKRLKELLRELERLQRGSSDVRELLREIKELVE-EIEKLAREQKYLVEELKRQ---G--NEIIRELERSLREQEELAKRLKELLRELERLQDDVELREIKELVEEIEKLAREQKYLVEELRQ |
3 | 4ui9I | 0.06 | 0.06 | 0.99 | 1.33 | DEthreader | | VTRMARKFTHISALLQYINLSLTCMCEAW-EEILMQMLGQSIESSYSSIQKLVISHLQSGSESLLYHLSELKGMASKELDAAGIEEAITAVGSFILKANELLQVIDSSMKNFHVERGQYLKLSLHFVKRRMENIIDQCLQKPD |
4 | 5doqA | 0.12 | 0.12 | 0.99 | 1.33 | DEthreader | | DLLSRILTELTLTHIIYATIGVGVPLMIAIAQWVGINDMHYILLARRWTRGFVI-TVAVGVVTGTAIGLQLSLLWPNFMQGQVISLPLFMETFAFFFEAIFGIYLYTWDRFENQKKLLLLIPVAIGSSASAMFITMVNAFMPF |
5 | 4ui9I | 0.07 | 0.07 | 0.94 | 1.33 | DEthreader | | LYSFLPEVTRMARKFTHISALLQYINLSLTCMCEAWEESSSIQKLVISLQSGSE-SLLYHLSELKGMASW-KQKY--EP-L-GL--DAAGIEEAITAVGSFILKANELLQVIVGQYDDSLHFVKRRMENIIDQCLQKPADVKS |
6 | 5doqA | 0.12 | 0.11 | 0.90 | 0.27 | HHpred | | FNPAMPTKVAHVLATSYMTSAFVLASIAAWHLWKGNR-HI---YHRKALHLTMK-TAFIFSVASALVGDLSGKFLAWHFRPHYFDVMVTIGVFLMVVAAVYWLGSIF--RWKWTAKNWFFGLLVAGGPLAMIAIEA------- |
7 | 6lodF2 | 0.10 | 0.09 | 0.90 | 0.70 | DisCoVER | | ---W--FSSMYPVTYIASM-LILTFGGGIIALAVLKSRNLLVDRLHDLGKFLF-AFVAVWAYVNFSEYPELTPWHGHRSAGGWEILGIVMIFGHFLPFMLLLSRFA-KR-R---L-A-NLTAIAIYLYLIEIVWYFWPADGF- |
8 | 4lz6A1 | 0.15 | 0.15 | 0.95 | 0.27 | MRFsearch | | ---AGVTIAFPIMMIMMSMAGALGIGGASVISRRLGERGEEANQVFGNILTVILVLSVIGFISAFTLLGPALQLFGATSVTQGYATDYLFPILLGSIFFFFAFAANNIIRSE--GNATFAMVTMIVPAVLNILLDVLFIFG-- |
9 | 3jbrE | 0.09 | 0.09 | 0.97 | 0.81 | SPARKS-K | | ----MSPTEAPKVRVTLFCILVGIVLAMTAVVSDHWAVLSEFTTQKEYSISAAAISVFSLGFLIMGTICALMAFRKK-RDYLLRPASMFYVFAGLCLFVSLEVMRQSVKRMIYYYSWSFACACAAFVLLFLGGISLLLFSLPR |
10 | 1m56A | 0.09 | 0.08 | 0.98 | 0.82 | MAPalign | | HIGAPDMARMNNLSYWLYVAGTSLAVASLFAP--GGNGQLGSGYSTDLAIFAV-HLSGASSILGAINMITTFLMRKVPLFAWSIFVTAWLILLALPVLAGAITMLLTDRNFGTFFQPVLYQHILWFFGHPEVYIIVLPAFGIV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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