>PF03612 (183 residues) IFVDKGSGGWGTGLRIEPKGKKTKVVSITGGGIHPVARKIAQVSGTEAVDGFKHSVSEDE MMCVVIDCGGTARIGLYPMKRIPTVDVLPSSPSGPLAKHIKEDIFVSGVTEKEIRLADEQ AEIPSESEDPSETSQLNINDKENLNEEMKKDEREDRDNFLMRFSKGIGKVTGTFYQAGRD SID |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | IFVDKGSGGWGTGLRIEPKGKKTKVVSITGGGIHPVARKIAQVSGTEAVDGFKHSVSEDEMMCVVIDCGGTARIGLYPMKRIPTVDVLPSSPSGPLAKHIKEDIFVSGVTEKEIRLADEQAEIPSESEDPSETSQLNINDKENLNEEMKKDEREDRDNFLMRFSKGIGKVTGTFYQAGRDSID | |||||||||||||||||||
1 | 3klbA | 0.14 | 0.08 | 0.57 | 0.65 | DisCoVER | ----------------GN-DRKILVAYFSCSVTKAVAEKLAAITGADLYEIKPFHPEKYEVLFVGFPVWWYIAPTIIAGKIVVPFATSGINCEKNLHKDIV-WKDGKLLN-GQITRD----LVTFEKI------------------------------------------------------- | |||||||||||||
2 | 3ir7A | 0.08 | 0.07 | 0.86 | 1.00 | DEthreader | -------LKYPWVNIANTIGDRVAGFSPIPMSSYASGARYLSLIGGTCLSFWYTSYNHHPRNLFIWRS---NLLGSGMLLLLVVTL-DFR--LSSTCLYSD--IILPTDWEKAIAKFSEVCVHLETDIVTLPMVLMIGNGGTEAEMILTTIRFRIQA----------GIHSTYHAQIHNSVTR | |||||||||||||
3 | 3hl0A1 | 0.09 | 0.06 | 0.67 | 0.62 | CEthreader | ARIVFSAGSSADVAEEIRRLGLSRALVLSTPQQKGDAEALASRLGAGVFSEAAEAYRAAGADCVVSLGGGSLGKAIALRTDAAQIVIPTTYAGSEVTPILGQTENGVKTTRGPEILPEVVIY------------------------------------------------------------- | |||||||||||||
4 | 4j8lA | 0.07 | 0.07 | 0.96 | 0.72 | EigenThreader | QAAAGAGTGAIRAGLAALLKPGQRLLVHDAPVYPTTRVIIEQ---GLTVDFNDQVVDEQQPDAALVQHTRQQPLATLRAAGVPALTDDNYAVKVARIGCECGANVSTFFLFGVVGDADVINRIRATLYSGGSQI-----QGAQALEVLRGLVFAPVHAVQAGVSERLLALLNGRVLEEAQKRG | |||||||||||||
5 | 5t96A | 0.17 | 0.13 | 0.75 | 0.36 | HHpred | VKLINGCGYFNTPLRFEVRGTKNKCVLLRSSSDTPLIMRNVELD--EYVD---TPN----------------TGGVYPSDGFD-----SLHGSASVRTFLTDALTCPDIDWSRIDAASCEYDSCPKMVKDF--------DQTSLG-NTDTLIVALHKEMISKLQRDITDVKIR---------- | |||||||||||||
6 | 3komA | 0.18 | 0.09 | 0.51 | 0.55 | MRFsearch | ------------GYLVKDNP-DAKLTIVATGSEVELAVKVANEFEKK------------GIKLNVASIP------------IPAVFVEAQ---PDWYKYPKAGGEVKGI---------------------------------------------PAEDLFKRFGFTVENISNIVAKYV----- | |||||||||||||
7 | 3hdtA | 0.13 | 0.09 | 0.68 | 0.38 | FFAS-3D | --------------------NKNLIITIEGSGGRIVGKKLAEELGIHFYDDDSEVRELAESEPCIFVGRAAGYVLDQDEDIERLIRIFVYTDKVKKVQRVEVD----CIDEERA-------------------------------KRRIKKIEKERKEYYKYFTLTLEETAELIKAYIRL--- | |||||||||||||
8 | 6pcvA1 | 0.11 | 0.10 | 0.92 | 0.64 | SPARKS-K | LLILPQEEDYG--FDIEEKNKAVVVKSVQRGS--LAEVAIYSINEDLVFSILNQSFCSRRPLRLLVATKAKEIIKIPDQPDTLCFQIRGAARGSEAMAALCAGQCILKVNGSNVDGAPEVLEHFQAFRSRREEALGLYQWIYHTHEDAQEARASQEDSPMVTLTVDNVHLEHG---------- | |||||||||||||
9 | 7bvyA | 0.14 | 0.12 | 0.87 | 0.69 | CNFpred | ---------------------AIVLLACPSGLEREALKNVAKEMGAELVIIEE-INIELPQGHLIIDIGGTTDLAIISSGDIVVSRSIKV-AGNHFDDDIRKYIYNIAIGQKTAEDVK-KFIGSLVKYHNERSMQIYGRDIVSGLPKEAKISSEEIRNVLLNAFSKITDLVIELLENTPPELA | |||||||||||||
10 | 6jsjA | 0.10 | 0.09 | 0.86 | 0.83 | DEthreader | ----------------TKQMLPSIVVIGSQSSKSSVLEIVLLPLSLVDLPYIILCLTAPN-IILAISAADNSALKASKPKGTIGVITKLASILN-NKKYPLSMGYVGVITQTKRELIK--EIMSALTSIELDTSYLFKVEFN-RL----YLNNIDVLLIKEFQEK-HTLSKYYSTADQVENCK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |