>PF03594 (378 residues) QDWSLSATIAGFLAVLISYSGPLIIFFQAAQKAHVSTEMMISWIWAISIGAAVTGIFLSI RFKTPVVTAWSAPGTALLVTLFPNISLNEAVAAYITAAIVIFLVGITGYFDKLLKWIPQG IAAGMMAGILFQFGLGLFLATDTLPLIVFSMLLCYLISRRFSPRYCMLWVLICGVAFSFF LGKMNPVPLDFQIARPQFIAPEWSWFSTLNLALPLILVSLTGQFLPGMAILKLSGYNTPA KPIITAASLASLFAAFAGGITIVLASITATLCMGKDAHELKDKRYIAGIANGLFYILGGV FAGSIVALFSLLPKELVAALAGLALLGAIASNIKIAMQEDQQRDPALITFLATVSGMHFL GLSSVFWGMCIGMLAYFI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QDWSLSATIAGFLAVLISYSGPLIIFFQAAQKAHVSTEMMISWIWAISIGAAVTGIFLSIRFKTPVVTAWSAPGTALLVTLFPNISLNEAVAAYITAAIVIFLVGITGYFDKLLKWIPQGIAAGMMAGILFQFGLGLFLATDTLPLIVFSMLLCYLISRRFSPRYCMLWVLICGVAFSFFLGKMNPVPLDFQIARPQFIAPEWSWFSTLNLALPLILVSLTGQFLPGMAILKLSGYNTPAKPIITAASLASLFAAFAGGITIVLASITATLCMGKDAHELKDKRYIAGIANGLFYILGGVFAGSIVALFSLLPKELVAALAGLALLGAIASNIKIAMQEDQQRDPALITFLATVSGMHFLGLSSVFWGMCIGMLAYFI | |||||||||||||||||||
1 | 5i6cA | 0.11 | 0.11 | 0.98 | 1.33 | DEthreader | PFFILLAFILGLQHALAMLAGVVTPPLIISSSLSLPSDLQQYLVSTSLIVCGLLSMVQITRSGVLSVMGVSFSIISVASGAFMCEAYGALIGTSACCALVEILLAF-VPPKVIQKIFPPIVTGPTVMLIGISLIGTGFKDWAGFIGLGFLVFVSIILCERGAMKCSVVIGLLVGCIVAAACGYFSHADIAAPASFWKTFPLSVY-GPMVLPIIAVFIICACECIGDVTATCDVREVRFEIQGAVLADGINSVVAALATMTPMTT-FAQNNVVI-ALT--R-CANRWAGYCCCLILIVAGIF-AKFAAAIVAIPNSVMGGMKTFLFASVVISGQAIVAKAPFTNRILTASMALGYGATLVPLETGFAVTAFVAMLLNAI | |||||||||||||
2 | 5i6cA | 0.14 | 0.13 | 0.97 | 1.33 | DEthreader | EKIPLLAFILGLQHALAMLAGVVTPPLIISSSLSLPSDLQQYLVSTSLIVCGLLSMVQITRSGVLSVMGVSFSIISVASGAFMCEAYGALIGTSACCALVEILLAF-VPPKVIQKIFPPIVTGPTVMLIGISLIGTGFKDWAGFIGLGFLVFVSIILCERFGAIMSVVIGLLVGCIVAAACGYFSHADIAAPAASWVKTFPLSV--YG-PMVLPIIAVFI-ICACECIGDVTADVRFESIQGAVLADGINSVVAALAT-MTPMT-T-F-AQNNVVIALTRCAN-RWAGYCCCLILIVAGIF-AKFAAAIVAIPNSVMGGMKTFLFASVVISGQAIVAK-APFTRRNRFILTASMALGYGATLTGFAVTAFVAMLLNAM | |||||||||||||
3 | 3qe7A | 0.15 | 0.14 | 0.95 | 3.45 | HHpred | RPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINPA-------TVLLFNGIGTLLYLFKGKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLTIIISITTLAVTVLGSVLFAIIPILIGVLVGYALSFAMGIVDTTPIAHWFALPTLYTPRFEWFAILTILPAALVVIAEHGHLVVTANIVKKDRDPGLHRSMFANGLSTVISGFFGSTPNTTYG----ENIGVMAITRVYSTW-VIGGAAIFAILLSCV-GKLAAAIQMIPLPVMGG-VSLLLYGVIGASGIRVLIKVNKAQNLILTSVILIIGVSGAKLKGMALATIVGIGLSLI | |||||||||||||
4 | 3qe7A | 0.13 | 0.12 | 0.93 | 1.12 | DisCoVER | -IGV-SER-PTIPLSLQHLFAMFGATVLVPVLFHI-------NPATVLLFNGIGTLLYLFICKIPAYLGSSFAFISPVLLLL-PLGYEVALGGFIMCGVLFCLVSF-I-VKKGTVLFPPAAMGAIVAVIGLELAGAAGMAGLPDSKTIIISLAVTVLGSVL-FRGFLVGYALSFAMGIV---DTTPIIA-HWFALPTLYTPRFEWFAILTILPAA-LVVIAEHVGHLVVTANIVKLLPGLHRSMFANGLSTVISGFFGSTPNTTY-GENIGVMAIRV-----YSTWVIGGAAIFAILLSC-VGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIEVDYKAQNLILTSVILIIGVSGAKVKGMALATIVGIGLSL- | |||||||||||||
5 | 5da0A | 0.12 | 0.11 | 0.92 | 0.40 | MRFsearch | ---PRKDVLAGIVVALA----LIPEAIAFSIIAGVDPQVG-------LYASFIIALITAFLGGRGMISAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAK-LARYLKFVPRSVMVGFVNALAILIFMAQLPQFWQMYAMVAAGLAIIYLLPLVFKMPSALVAIVVLTVVAVVTGADVGDMGTLPTALPHFQFPQVPLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQS-----MINVTSGGRGRLSTFVAGAFLMVLILALQ---PLLVQIPMAALVAVMMVVAISTFDWGSLR-----FPKGETVVMLATVAVTVFTH---DLSLGVLIGVVLSAL | |||||||||||||
6 | 5da0A | 0.13 | 0.12 | 0.92 | 2.60 | SPARKS-K | FANPRKDVLAGIVVALAL----IPEAIAFSIIAGVDP-------QVGLYASFIIALITAFLGGRPGMIAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKL-ARYLKFVPRSVMVGFVNALAILIFMAQLPQFWQMYAMVAAGLAIIYLLPLVFKMPSALVAIVVLTVVAVVTGADVKTMGTLPTALPHFQFPQVPLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMI-----GQSMINVTSGGRGRLSTFVAGAFLMVLILAL---QPLLVQIPMAALVAVMMVVAISTFDW------GSLFPKGETVVMLATVAVTVFTHD---LSLGVLIGVVLSAL | |||||||||||||
7 | 5i6cA | 0.12 | 0.11 | 0.97 | 1.58 | MAPalign | -IPVLLAFILGLQHALAMLAGVVTPPLIISSSLSLPSDLQQYLVSTSLIVCGLLSMVQITGSGVLSVMGV-SFSIISVASGAFNQAYGALIGTSACCALVEILLAF-VPPKVIQKIFPPIVTGPTVMLIGISLIGTGFKDWPEFIGLGFLVFVSIILCERIMKSCSVVIGLLVGCIVAAACGYFSHADIAAPAASVKTFPLSVYGPMVLPIIAVFIICAC-ECIGDVTATCDVSRLEVRIQGAVLADGINSVVAALATMTPMTTFAQNNVVIALTRCA----N-RWAGYCCCLILIVAGI-FAKFAAAIVAIPNSVMGGMKTFLFASVVISGQAIVAKARRNRFILTASMALGYGATLFENAIELVLGFAVTAFVAM- | |||||||||||||
8 | 5i6cA | 0.14 | 0.14 | 0.98 | 0.92 | CEthreader | KIPVLLAFILGLQHALAMLAGVVTPPLIISSSLSLPSDLQQYLVSTSLIVCGLLSMVQITRSGVLSVMGVSFSIISVASGAFCPEAYGALIGTSACCALVEILLAFVP-PKVIQKIFPPIVTGPTVMLIGISLIGTGFKDWAGGFLVFVSIILCERFGAPIMKSCSVVIGLLVGCIVAAACGYFSHADIDAAPAASFIWVKTFPLSVYGPMVLPIIAVFIICCIGDVTATCDVSRFESRIQGAVLADGINSVVAALATMTPMT-----TFAQNNVVIALTRCANRWAGYCCCLILIVAGIFA-KFAAAIVAIPNSVMGGMKTFLFASVVISGQAIVAKAPFTRRNRFILTASMALGYGATIELVLETGFAVTAFVAML | |||||||||||||
9 | 3qe7A | 0.13 | 0.13 | 0.95 | 1.36 | MUSTER | RPPLLQTIPLSLQHLFAMFGATVLVPVLF----HIN-------PATVLLFNGIGTLLYLFICKIPAYLGSSFAFISPVLLLLP-LGYEVALGGFIMCGVLFCLVSFIVKKAGTGWLDPPAAMGAIVAVIGLELAGVAAGMASKTIIISITTLAVTVLGSVLFRGIPILIGVLVGYALSFAMGIVDTTPIAHWFALPTLYTPRFE-WFAILTILPAALVVIAEHVGHLVVTANIVKKDLGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMA-----ITRVYSTWVIGGAAIFAILLSCV-GKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKNKAQNLILTSVILIIGVSGAKVNAELKGMALATIVGIG | |||||||||||||
10 | 6rtcA | 0.13 | 0.12 | 0.93 | 3.80 | HHsearch | KDYIIPDLLGGLSGGCIQV----PQGMAFALLANLPAVNG-------LYSSFFPLLTYFFLGGIHMVPGTFAVISILVGNICLQERLHVSATLACLTAVIQMALGFMQF-GFVAIYLSESFIRGFMTAAGLQILISVLKYIFGSLIFALVSGVFLVLVKELNHKPTEMIVVVVATAISGSCKMPKKYHMEIRQGFPTPVAPMVSWKDMVGTAFSLAIVGYVINLAMGRTLASKHGYDVDSNQEMIALGCSNFFGSFFKIHVICCAL-----SVTLAVDGAGGKSQVASLCVSLVVMITMLVL---GSYLYPLPKAVLGALIAVNLKNSLLTDPYYLWR--KSKLDCCV-WVVSFLSSFFLS---LPYGVAVGVAFSIL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |