Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | PILLGYLPIGLAFGVLANNAGISPVNSLLMSLLVFAGASQFIAIGLIEKGITTFSIILTTFLVNSRHILMSASLSPYFQKINSWKSSLLSFGITDETFALNSVELKEDQTKNHYYIAGVHLTAYIAWVSSTAIGAYLGNY |
1 | 5nikJ3 | 0.06 | 0.04 | 0.59 | 0.65 | DisCoVER | | GGIGVMNIMLVSVTREIGIVGARASDVLQQFL--I-------------------------------------------------------EAVLVCLVGGALGITLSLLIALLLAFLCSTVTGILFGWLPARNAARDAL- |
2 | 4pmwA2 | 0.04 | 0.03 | 0.75 | 0.83 | DEthreader | | VAERAT--S-VY--LV--Q-------------------------SYDA-YEYRDSNKLVEEFMLLANMAVAHKIFRFPESGQQEQFRH-LY-THFFADVIVHRLASEQPDVEPDTLQKQADHCNDRRMASKRVQELSILF |
3 | 3kroD | 0.05 | 0.05 | 1.00 | 0.48 | CEthreader | | LLAGGKRVRPMLCIAACELVGGDESTAMPAACAVEMIHTMSLMHDDLPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVASEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGG |
4 | 1aj8A | 0.05 | 0.05 | 0.92 | 0.70 | EigenThreader | | KAMDVALILYAEAVMTVGSTLSDYYSAILAG-----------IGALKGPIHGGAVEEAIKQFMEIGEEWFFKALQQKYKTYDPRARIFKKYASKLGAERLERLVLSKKGISINVDYWSGLVFYGTIFAMGRIAGWTAHLA |
5 | 5ys3A | 0.20 | 0.19 | 0.91 | 0.23 | HHpred | | PAPLGLMGFGMTTILLNLNAGFFALGIILAMGIFYGGIAQIFA-GLLEKGNTFGLTAFT----SYGSFWLTLVAIPKMGLTAPNAQYLGLWGVFTLFMFFGTLKA------ARALQFVFTVLAFGNIAVAGWIGLVCG-- |
6 | 4bwzA | 0.10 | 0.10 | 1.00 | 0.30 | MRFsearch | | PVVIGEVLAGVLVGPALLGEILEFLAELGAVFLLFMVGKEAFLVAVLGVALPFLGGYLYGLEIGLPALFLGTATARVLQELRPYSRIILGAAVIDDVLGLIVNGVAETGQVEVGAITRLIVLSVVFVGLAVFLSTLIARL |
7 | 3wdoA2 | 0.12 | 0.11 | 0.93 | 0.78 | FFAS-3D | | --HMLLMSTFVALPGQLADAGFPAAEHVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLVVAEIVLWNAFWQLVV--GVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYST------SQFLGVAIGGSLGGW |
8 | 3wdoA | 0.09 | 0.09 | 0.99 | 0.86 | SPARKS-K | | CLHMLLMSTFVALPGQLADAGFPHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKE-SPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGM |
9 | 3rkoB | 0.12 | 0.11 | 0.95 | 1.00 | CNFpred | | MLLGGAVGKSAQQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQ---TDIKRVLAYSTMSQIGYMFLALGVQ----AWDAAIFHLMTHAFFKALLFLASGSVILAC |
10 | 2wp8J2 | 0.10 | 0.09 | 0.85 | 1.00 | DEthreader | | EGARGT--SVYL--VD-----PE-VKV-HMD--SE---TSDPNE--IKKLLA--TNSLVEEFMLLANISVARKIYAFPQTSGAYSYFR-IYTHCDVVAHRQLAGPLSLTHRDKNKMDMICRNINRKHRNAQFAGRASIEY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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