Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | PVYQRCFQDGAIVKQNPSKEAVTEVCLKDDVSMIKTEARYVRNATGVFSNNVAIRKWLVSDWHDCRPKKIIGGHINVIEVGDDLSLHTESYVCSADCTIGVDKETAQVRLQTDTTNHFEIAGTTVKSGWFKSTTYITLDQTCEHLKVSCGPKSVQFHACFNQHMSCVRFLHRTILPGSIANSICQNIEIIILVTLTLLIFILLSILSKTYICYLLMPIFIPIAYMYGIIYNKSCKKCKLCGLVYHPFTECGTHCVCGARYDTSDRMKLHRASGLCPGYKSLRAAR |
1 | 6y9lB | 0.14 | 0.08 | 0.54 | 1.02 | HHpred | | ------ENNGVIYSCVSDSAEGLEKCDNSLLRFSKVPVIPITNKRHFSVGTKFFI---SES------LTQDNYPITYNSYPTNGTVSLQTVKLSGDCKITKSNFPYTVSITSPEKMGYLIKKVEHKVISFSGSASITFEMLDGEHNLLCGDKSAKIPKTNKRVRDCII--------------------------------------------------------------------------------------------------------------------- |
2 | 6y9lB | 0.08 | 0.05 | 0.62 | 0.71 | DisCoVER | | ------PNNCL-----NASSLKCEIKGISTYNVYYQVE----------NNGVIYSCVSD------SAEGLEKCDNSLNLP----------KRFSKVPVIPIKRHFSVGTKFFISESDNYPITYNYPTNGTVSLQTVKLSGDCKITKSNFANPYTVSITSPEKIMGY--LI------------------K-KPGENV--EH-----------------------------------KVISFSGSASITFLDGEHNLLCG-----------DKSAKIPKTNKRVRD- |
3 | 5oljA | 0.04 | 0.03 | 0.70 | 0.67 | DEthreader | | SLPIIRIAVMTLNRLQ-----NDFKM--------QDMNK----------RYVDSWIQALKFTAGFAYVSEKDGFAHI-----------WDVTLVTVFYQSAEESPIRRAVYA-------VGTNDALFSGYYINTYSSAATPT----------PNSQQYSFDWEHYLASK-G--------Y--VV--AC--V--DGRGTGARGEEWR----KC-TYMQLGVFESDDQIAAATIGRIGIWGWS-GGTTLLCG---AGIAVAPVYDNVNHSIYTRYLYR--------- |
4 | 5nrlH | 0.04 | 0.03 | 0.84 | 0.77 | CEthreader | | GAIDWHPDSNNQMISCAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIG-------SASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN--------------------------------------- |
5 | 3j0fI | 0.03 | 0.02 | 0.79 | 0.75 | EigenThreader | | LGTCSYCHHTVPCFSPVKIIRIQTSAQFGYDQKYRYMKISTCPPGDSVTVSSCTLARKIKPKFVGGKKIPC--TVYDLEESSGKVYAKLIPCMVPVAHAIHGFKHISL----QLDTDHTRRLGANPEPTTEWIVNFTVD-RDGLEYIWGNHEPVRVYAQESAP---------GIVQHYYHRHPVY--------------------TILAVASATVAMMIGVTVAVLCACKARRECLTPYALA----------PNAVIP---------------TSLALLCCVRSA |
6 | 3w5kB2 | 0.22 | 0.03 | 0.14 | 0.40 | HHpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PFSCPHCSRAFAKY-QCQ---ACARTFSRMSLLHKHQESG-CSGCP------ |
7 | 6dxuD | 0.08 | 0.05 | 0.66 | 0.53 | MRFsearch | | ----------LNLVYLP------------EVSFEQIHLESSLSSNLKEGILKVKTSFYNPEDIR-------KADVTVSVYDVDRKPVFSKTLEG----ILPLGDQLLAKMKIKNPVLWDVD----VPQLYTCELTVKTPDQTFTTEERFGFRHTEFKDKEDMMRREMRMMKDMGQQSEIILDLCDELGILVWEEKKQARRMLANMIVQKSAIRAFMKELHDMAHR------------------------------------------------------------ |
8 | 2yn6A | 0.13 | 0.09 | 0.69 | 0.55 | FFAS-3D | | -----------------------------DVSVIFINKIYGVNTLEQTYKVDGYIVAQWTGW---VPALEFINVVKRLMLFPDGRVINARFLGSFSNDMDFDRQQFVLELEPFSYNNQQLQVYTENIDNEEIDEWWIRGKASTHISDINQNEFSRITVRIDAVRNPSYYLWSFILPLGLIIAASERLQTSFTLMLTVVAYAFYTSVIDQMIIAGYGSIFAAILLIIFAHH------------------------------------------------------- |
9 | 6y9lB | 0.15 | 0.08 | 0.53 | 0.74 | SPARKS-K | | ------------DLPNNCLNASSLKCEIKGISTYNVYYQVENNGV-----IYSCVSDSAEGLEKCDPVIPSVGT-KFFISETNGTVSLQTVKLSGDCKITNFANPYTVSITSPEIMGYLIKKPEHKVISFSGSASITFTEEMGEHNLLCGDKSAKIPKTNKRVRDCII--------------------------------------------------------------------------------------------------------------------- |
10 | 6b6lA | 0.09 | 0.06 | 0.70 | 0.69 | CNFpred | | ----------TFLKITN------PLHFETW--GTFVTTPVATA---DKAEVHVQSVLANT------EKVTGKVILETRIVDKNHTVARKEQLVT----LDNKKTEVGHALEVLAPQLWSID----NPYLYQVVNRLLQDKVIDEEYISIGIRNIAFSAE------NGFQLNGKSM-KLKGGCIHHDNGLLGAKAFDRAEERKIELLKAAGFNALRLSHNPPSIALLNACDRL-------GMLVIDEAFD------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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