Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | RSMTLGMLASQVAAGEIKPDQSVDKWKLFRTLCEAKPLLGITDRALAVLNALLSFYPKNELAQDNGLIVFPSNVQLSLRTHGMAEQTVRRHLAALVDAGLLVRKDSPNGKRYVRRDRAGEIDEAFGFSLAPLLARAEEIEQLAAAVMAERLHVQRLRERITLCRRDIAKLIEAA |
1 | 4nb5A | 0.12 | 0.10 | 0.79 | 1.23 | HHpred | | -----------------------DIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPER-----------QSSEELATAL-AASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGE-RERIRAMAELQDLADVGLRALQRSRRLREMRDLLAYMENVVSDALGRY |
2 | 4nb5A | 0.12 | 0.10 | 0.79 | 1.22 | FFAS-3D | | -----------------------DIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDPER-----------QSSEELATAL-AASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGERERIRAMAELQDLADVGLRALPQRSRRLREMRDLLAYMENVVSDALGR- |
3 | 5ytiA | 0.09 | 0.07 | 0.78 | 0.83 | DEthreader | | IIELFQNNRQAADALNDTGVFRI---PSGNG-R-------------F-AI--R-ETLT-PN---TGTA-TTFAL-VVSGTSNVIPPDAPL-YQEGSAVVSGLPK------AGDS---TSSVEKAA-TQTENNQLLAQIDSALGHILSVQSDLGARLNQLETAEKANNDYLDISA |
4 | 3ecoA | 0.13 | 0.09 | 0.65 | 0.83 | DEthreader | | -----------------LF---ISHEM-KQKADQKLEQFDITNEQGHTLGYLYAHQ---Q--------DGLTQNDIAKALQ-RTGPTVSNLLRNLERKKLIYRYVDAQR-RKN-IGLTTSGI----KLVEAFTSIFDEMEQTLVSQLSEEEN---------------------- |
5 | 2vn2A | 0.20 | 0.12 | 0.59 | 1.16 | HHpred | | ----------AEWLAQ--GSIAVPK-LLL----GHYKQLGLGEGELVLLLHMQSFFEE--------GVLFPTPAELAERM-TVSAAECMEMVRRLLQKGMIAIEE--------------------KYTLEPLWEKLVHHLYTQAAQQGE------------------------- |
6 | 6pcoA | 0.17 | 0.09 | 0.55 | 0.67 | DisCoVER | | --YQRHVAIFQQTI--PD-------------SKLT---A----AQFVV------------L----CALRACSLVDVVKAT-AIDQATVRGVIERLKARKLLAVSHDDRRKVLVTL-----TPDGRALVEEMVPFA--QITQS-------------T--F--------------- |
7 | 4nb5A | 0.12 | 0.09 | 0.78 | 0.40 | MRFsearch | | -------------------------MEFVEQMGGYFESRSLTRLAGRLLGWLLVCDP-----------ERQSSEELATALA-ASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGER-ERIRAMAELQDLADVGLRALQRSRRLREMRDLLAYMENVVSDALGRY |
8 | 2a61A | 0.13 | 0.10 | 0.80 | 1.00 | SPARKS-K | | -------------KQPFERILREICFMVKVEGRKVLRDFGITPAQFDILQKIYFEGP-------------KRPGELSVLLG-VAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITR--------KGEEVIEKVIERRENFIEKITSDLKSSKILDYLKELKGVMERNFSKQ |
9 | 2xubA | 0.08 | 0.07 | 0.97 | 0.76 | MAPalign | | --YAEVSNTFVRLADTHFVQRCFHQHFRDQAIVSAVANR-MDQTSSEIVRTMLRMS-EITTSSSAPFTQPLSSNEIFRSLPNISKQVLDQYLTLLAPLEFVGKSGD-SGGGMYVINLHKAKMLSENFMVILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAII- |
10 | 4nb5A | 0.13 | 0.10 | 0.79 | 0.52 | CEthreader | | -----------------------DIMEFVEQMGGYFESRSLTRLAGRLLGWLLVCDP-----------ERQSSEELATAL-AASSGGISTNARMLIQFGFIERLAVAGDRRTYFRLRPNAFAAGE-RERIRAMAELQDLADVGLRALDAPPQRSRRLREMRDLLAYMENVVSDA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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