Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | KLLGENKPKPIDLYIAFLSLTQLMLLITMGLIAVDMFMPWGRWNSTTCQSLIYLHRLLRGLALSATCLLNVLWTITLSSRSSCLTKFKHKSPHHISGAFLFFYVLYMSFSSHVLVSIIVTPNLTSEDFMYVTQSCSLLPMSYSRESRFSTLMAIRETFLISLMALSSGYMVALLWRHKKQAQHLRSTSLSSKASPEQRATRTIMLLTSLFVVLYILERVVFQSRLKFKDCSVFYFVHIIMSHSYATVSPFVFICTEKHIIKFWES |
1 | 5zbhA | 0.12 | 0.11 | 0.98 | 1.33 | DEthreader | | IILKQKERNVTNILIVNLSFSDLLVAIMCPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPR---GW-R-PNNRHAYVGIAVIWVLAVASSLPFLIYQVMTEPFQN-VTLDDKYVCFDQFSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNIFEMLIWDAYDNKYSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNIAHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQF |
2 | 5zbhA | 0.11 | 0.11 | 0.98 | 1.33 | DEthreader | | IIIKQKERNVTNILIVNLSFSDLLVAICLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIWSLVLIAVERHQLIINPR--GW--R-PNNRHAYVGIAVIWVLAVASSLPFLIYQVMTDEPFNVTLDKDKYVCFDQFPSDSHRLYTTLLLVLQYFGPLCFIFICYFKIYIRLKRRNIFEMLIWAYDNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDNIIAHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQF |
3 | 4rnbA | 0.10 | 0.10 | 0.94 | 3.71 | HHpred | | -WKNHHMRTVTNYFIVNLSLADVLVTIT-CLPATLDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAIHP----------STAKRARNSIVIIWIVSCIIMIPQAIVMECSTVF----KTTLFTVCDERWGGEIYPMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQGIDCSFWNESRSKQIRARRKTARMLMVVLLVFAICYLPISILNVLRVFGMDVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKA |
4 | 4grvA1 | 0.10 | 0.09 | 0.91 | 0.57 | DisCoVER | | -SL----QSTVHYHLGSLALSDLLILLLAMPELYNFIWHHPWAGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTL--MSRSR-TKKFISAIWLASALLAIPMLFTMGLQN-RSADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVI---SILNTVIANKLTV-MS--------GSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYFDFYHYFYMLTNALAYASSAINPILYN-LV--SANFRQ- |
5 | 5nddA | 0.15 | 0.14 | 0.96 | 0.17 | MRFsearch | | -LFRTKKKAPAVIYMANLALADLLSVIWFPLKIAYHIHNNWIYGEALCNVLIGFFYANMYCSILFLTCLSVQRAWEIVN----PMGHSRKKANIAIGISLAIWLLILLVTIPLYVVKQTIF-----IPALQITTCHDVLPVGDMFNYFLSLAIGVFLFPAFLTASAYVLMIRALADLEDNWETLNDNYLENSEKKRKRAIKLAVTVAAMYLICFTPSNLLLVVHYFLSHVYALYIVALCLSTLNSCIDPFVYYFVSHDFRDHAKN |
6 | 6ko5A2 | 0.09 | 0.09 | 0.97 | 1.94 | SPARKS-K | | VSRFRELRTTTNLYLSSMAFSDLLIFLCMPLDLVRLWQYPWNFGDLLCKLFQFVSESCTYAKVLTITALSVERYFAICPLR----AKVVVTKGRVKLVIFVIWAVAFCSAGPIFVLVGVEHEQGTDPWDTNECRPTEFAVRSGLLTVMVWVSSIFFFLPVFCLTVLYSLIGRKLWRRR---RGDAVVGASLRDQNHKQTVKMLAVVVFAFILCWLPFHVGRYLFSKFEPSQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAVFR |
7 | 4grvA | 0.09 | 0.09 | 0.97 | 0.66 | MAPalign | | -LARKSLQSTVHYHLGSLALSDLLILLLAMPVELYNVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAIC--HPFKAKTLMSRS-RTKKFISAIWLASALLAIPMLFTMGLQNRSADGTH-PGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTNRAKRVITTFRTGTWDAYQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISFYHYFYMLTNALAYASSAINPILYNLVSANFRQV--- |
8 | 4grvA | 0.10 | 0.10 | 0.97 | 0.39 | CEthreader | | TLARKSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAK---TLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHP-GGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQV--- |
9 | 4n6hA | 0.12 | 0.12 | 0.95 | 1.28 | MUSTER | | IVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCPVKALDF----RTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPS----PSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVR------LLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQ |
10 | 6kp6A | 0.08 | 0.08 | 0.96 | 1.43 | HHsearch | | IKVNRQLQTVNNYFLFSLACADLIIGAF-SMNLYTTIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVKPLTYP----ARRTTKMAALMIAAAWVLSFVLWAPAILFWQFVVGKRT----VPDNQCFAQFLS--NPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHGIDCSLPILKSQMAARERKVTRTIFAILLAFILTWTPYNVMVLVTFCQSIPDTVWSIGYWLCYVNSTIRPACYALCNAEFKKTFRH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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