>PF03394 (239 residues) MKNTYLYHNYSYGWIPETSIWSSRFANLDVTDYYPITINLLKKFEFMMALYKGPILPYEE KINTEFISKGSFYGRYINFLRNFSILPTNEFISFLLLTSIPIYNILFWFKSTQFDIKKHT LFSEVYSNNDRHIELAKYFRQSGDYKPLFSRLKEDNIYTQPFPLNTSRILHQNLPNSSTI SDYETLSNLSAILYLTNYDPVLMFLVFYVPNISVTTKITPGVEYLMKKLNMDKKDITLI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | MKNTYLYHNYSYGWIPETSIWSSRFANLDVTDYYPITINLLKKFEFMMALYKGPILPYEEKINTEFISKGSFYGRYINFLRNFSILPTNEFISFLLLTSIPIYNILFWFKSTQFDIKKHTLFSEVYSNNDRHIELAKYFRQSGDYKPLFSRLKEDNIYTQPFPLNTSRILHQNLPNSSTISDYETLSNLSAILYLTNYDPVLMFLVFYVPNISVTTKITPGVEYLMKKLNMDKKDITLI | |||||||||||||||||||
1 | 2enxA1 | 0.10 | 0.06 | 0.64 | 0.62 | DisCoVER | SKILVFGH-QNPDSDAIGSSVAFADTEA-V--ALGTP------------------------------------------------N---E-ETAYVLDYFGVQ-APRVVESA-KAEGVETVILTDHNEFQQSI-----------------------SDIKDVTVYGVVDHHVANFLYMRLEVG-SA--SSIVYRMFSVPKELAGLLLSGLISDTLLLDIPVAKELAELAGVNLGMLKA- | |||||||||||||
2 | 2f3oA | 0.12 | 0.08 | 0.71 | 0.67 | DEthreader | -----------G----------------TNR-GVLTEASHYEQAISMGRIDLLAWIKTNEIVP--AF--DSLESQATNQLRQNNNLALFFTTCVEIATSSDA-ALI--N---------------VAKALEYALEQVSHIVKLVVR----------GSLVAIEG-------VCLHLLQSPKADKYTKMVLEWYCEEVNRFAAGCYPPGVSPTVTVINASKLSYENLP-NG--MGVMHVQF | |||||||||||||
3 | 4zlhA | 0.07 | 0.07 | 0.99 | 0.59 | CEthreader | EAHLTLGNLFRSRGEVDRAIRIHQTLMESASLTYEQRLLAIQQLGRDYMAA-GLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKAIDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNSARVSIMMGRVFMAKGEYAKAVESLQ--RVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAVEENTGADAELMLADIIEARDGSEAAQVYI | |||||||||||||
4 | 3hymH | 0.04 | 0.04 | 0.97 | 0.60 | EigenThreader | ENLDVVVSLAERHYYNCDFKCYKLTSVVEKDPFHASCLPVHIGTLVEL----NKANELFYLSHKLVDLYPNPVSWFAVGCYYLVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAAA--YFTAAQLIGLEYGLTNNAERFFSQALSIAPEDPFVHEVGVVAFQNGEWKTAEKWFLDALHRQALVLIPQNASTYSAIGYIHSLGNFENAVDYFHTALGLRRDDTFSVTLG | |||||||||||||
5 | 4bndA | 0.15 | 0.11 | 0.73 | 0.34 | HHpred | -------------------------FDIDNTPKMPIFPEMAELLAT---LSQ--------K-YIIAP----ISGQKYDQFLIIINLPESA-----NLDNFHVAQGT-----QYYAHKAKQVFN-YALTDEQANAIMGALEKAAKELGHW---DESLLPGDEIENRESMIAYSAIG-QKAGV--------EAKQAWD-PDMIAKLASQYAPEFEFEINGFVGMNHLMEELNVTKEEILYF | |||||||||||||
6 | 4fp9B | 0.13 | 0.07 | 0.50 | 0.50 | MRFsearch | ------------------------------------SLELERVMSSLLDMG----------------------------------FSNAHINELLSVRLQQLLDIISEFILL----------------GLNPEPVCVVLKKS------------PQLLK---------------------LPIMQMRKRSSYLQKLGGEGKLKRVLYCCPEIFTQQDINDTVRLLKEKCLFTVQQVTKI | |||||||||||||
7 | 1w6jA2 | 0.14 | 0.10 | 0.77 | 0.47 | FFAS-3D | --------NGSQIW--DTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLS------QVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKA---VLLLQEKCPHVTEHIPRERL--------CDAVALLNMRNPDGGF----------ATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQ------ALKYFHKRFPEHEIRETLTQGLEFCRRQ----------- | |||||||||||||
8 | 6w5cA | 0.12 | 0.11 | 0.98 | 0.51 | SPARKS-K | SIRNHSSQAKEYREEIFELLRDGKLSVLKLSSLSNLSFVMFKVAKSLIGTYFGHLLPITDKADPEMFALRALEEKRLNKVKSKKEVIANKIVAKALELRDKYGPVLIKGENKKGKKSSTNSFLMDWL----ARGVANKVKEMVMHQGLFVEVNPNFVHKNPENTFRARYSRC-TPSELTEKNRKEILSFLSPTNAYYNEGAMAFLATYGLKKDVLGVSLEKFKQIMANILHQRSEDQLL | |||||||||||||
9 | 3rkoC | 0.11 | 0.07 | 0.62 | 0.71 | CNFpred | -----------------------------------LMLGFFIAFAVKMPVV-------------------PLHGWLPDAHSQAP--TAGSVDLAGILLKTAAYGLLRFSLPL-FPNASAEFAPIAMWLGIGIFYGAWMAFAQTDIKRLI--------------------------------AYTSVSHMGFVLIAIGSQLAYQGAVIQMIAHGLSAGLFILCGQLYERIHT--RDMRMM | |||||||||||||
10 | 4h1gA | 0.05 | 0.04 | 0.77 | 0.83 | DEthreader | KTWIALMFNLQEPFTWPLIAADGAGTFLDLIHMNTYINGP-APF-GV-SA--NA--KLLLLVNKPLGADRITMEAQ-EIM--P--N----IPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNA--A--ALKG-----------NIRVFC-QQELFLFDI-YGQTIYNEAI---KEQANKSLSCLGDV------------IHSLNLKDGSHVPYRNSKLTYLLKHSLGG-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |