>PF03385 (388 residues) RTTDIWRSFISQKILHLSGLTVSFVPTNAIQFRNAHDYLKDFKDEKQVYEDSGKIIDFLN GWNCLKVINLEDCINELLEDLVENNLWGEDDSKLMKLFLNDLKSMGFKYPDLIGEKYEDP YIASDNETDRNVNCRRMNLEFELIDPKKYDQENIRKAEQKINYFGDLVDWCNETGYSNLS KSFPSAKQLSEKHEESYVLQQDKNSVLIAVNNFPWKYGVGLIQRLYQPYFAAVIFCGSWY SDEVVDVDNYTSTLNPINYIHMNPAEIHKGYFAYHCVTLVKEMRLNNVNGYFLMADDTIF NIWQRIDYSRVHHLMGPVADYGYNWWNLEYGLRAAKNMVLTIKNNTDSKIEKAWKQFTEE LKTYGYMKENHTAFDEIASGKGKSVSDF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | RTTDIWRSFISQKILHLSGLTVSFVPTNAIQFRNAHDYLKDFKDEKQVYEDSGKIIDFLNGWNCLKVINLEDCINELLEDLVENNLWGEDDSKLMKLFLNDLKSMGFKYPDLIGEKYEDPYIASDNETDRNVNCRRMNLEFELIDPKKYDQENIRKAEQKINYFGDLVDWCNETGYSNLSKSFPSAKQLSEKHEESYVLQQDKNSVLIAVNNFPWKYGVGLIQRLYQPYFAAVIFCGSWYSDEVVDVDNYTSTLNPINYIHMNPAEIHKGYFAYHCVTLVKEMRLNNVNGYFLMADDTIFNIWQRIDYSRVHHLMGPVADYGYNWWNLEYGLRAAKNMVLTIKNNTDSKIEKAWKQFTEELKTYGYMKENHTAFDEIASGKGKSVSDF | |||||||||||||||||||
1 | 6lzxA | 0.12 | 0.09 | 0.77 | 0.71 | DisCoVER | LHVVFF--PI---M-----AHGHMIPTLDIARLFAARNV--------RA-TII-TTPLNFKFPAQLIEKFFKGVGLLREQLLEKTRP--NCL-VA--DMFFRLVFHGTSFFSLHSSDEELFSLPLFPHDIKMMRLQLPGVIVNSFYELGRRAWN--IG-PV--S--LCNRH------ECLKWLNSK--K------------K-NSVIYICFGSTAAPQLYEIAMALEASGQEFIWVV-RN-----DS-WLPFEVEKGLIIRG---------WA--PQVLILEHEA--I--GAFVTHCGWNSTLEGITAGVPMVTWPIFAEQFYNEVNQILKI--GV-PVG--ANKWSRETSIED---------VIKKDAIEKALREIRRSRAKKLKA- | |||||||||||||
2 | 1kb0A | 0.06 | 0.04 | 0.68 | 0.67 | DEthreader | PAAA--V---------------TIGRVEATPVVVDGIMYIDTRTG-NRI-WT--YDPQIDRSTG-K---GADGRL-IAL--D----AATGKEVWHQ-APRVFKGKVIIGNGGAYGVRPGDPSAARTWDPSGKWGGGGTMWDSMTFD----------V--GT-GNGSP-WSHKVRSPK-GG----------------------DNLYLAS-----------IVALDPGKYKWHYQETM-AIKIKPRKVILDRTN---GKFISAK---NFVPVNWASGYDGKPIGI------------------------GPYGAHNWHPM------LPAQN-VP--VNLMDDKKWEFNQAKPQSGTGWN---GGVGLAAGLYNCVFCHGVPVDRGGNIP | |||||||||||||
3 | 1qh1A | 0.06 | 0.05 | 0.87 | 0.57 | CEthreader | HGPVGCGQYSRAGRRNYYTGVSGVDSFGTLNFTSDFQGLIGDDISAVANASSKALKPVIPVRCEGFRGVSQSLGHHIANDVVRDWILNNRIGGDAWASRILLEEMGLRVVAQWSGDGTLVEMENTPFVKLNLVHCYRSMNYIARHMEEKHQIPWMEYNFGPTKIAESLRKIADQFDDTIRANAEAVIARYEGQMAAIIAKYRPRLEGRKVLLYMGGLRPRHVIGAYEDLGMEIIAAGYEFAHNDDYDRTLPDLKEGTLLFDDAS------------SYELEAF-VKALKPDLIGSGIKEKYIFQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMTLNNPAWNELTAPWL------------------------------------ | |||||||||||||
4 | 1bxrA | 0.05 | 0.04 | 0.92 | 0.68 | EigenThreader | QACEFDYSGAQACKALREEPDAVLPTMGFGVTMIGATADAIDKAEDEEFEEICARGLDLSDAMGIHTGDSIMRNASMAVLREIGRVSRSSALASKATGAKVAAKLAVGYTLDELMNDITGGRTPASFEPSI---DYVVTKIPRFNFENIDRWFLVQIEELVRLEEKVAEVGITGLNRLAKLAGVREAEIRKLRDQYDANPSTDREKIMVLGGGPFDYCCVHASLALREDGYETIMVNCNPE------TVSTDYDTSDRLYFEPV-------TLEDVLEIVRIEKPK----GVIVQYGG----QTPLKLARALEAAGVP-----VIGTSPDAIDRAEDFQHAVERLKLK---QEMAVEKAKEIGPSYVLGGRAMRYFQTAVSVSNDAPV | |||||||||||||
5 | 2pffA1 | 0.13 | 0.07 | 0.59 | 0.50 | HHpred | ------------------------------------------------------------------------------------------------------------------------------------TFKDKYVLITGAGK-----GSIG-----AEVLQGLLQGGAKVVTSRFSKQVTDYYQSIYA-----KYGAKGSTLIVVPFNQGSKQVEALIEFIYDTEKNG----GLWDLDFAAIPEQGIELEHIDSKSEFAHRIMLTNIRMMGCVKKQKSARETRPAQILKLSLETLFNRWHSENQGAIIGWTRGTAEEKMGVRTFSQKEMAFNLLLLELCQKSVPELKEFTAKLRKELVETSEVRKIETALEHKVVNG------- | |||||||||||||
6 | 2dhrA | 0.13 | 0.10 | 0.73 | 0.42 | MRFsearch | --KEIVEFLKNPSRFHEMGKGVLLVGPPFITASG---------------------SDFVEMFVG----VGAARVRDLFETAKRHAGGNDEREQTLNQLLVEMDGFEKDTAIVVMA-------------------GRFDRQIAIDAPDVKGREQILRIHARGFVGADLENLLNEAALLAAREGKITMKDLEEAADRVHFLEHADGVHKVTIVPRSRKRLLDQIAVALAGRAAEEIVF--------------------------------FRQATELARRMITEWGMHPEFGPVAYA-------------VREDTYLGGYD----VRQYSEETAKRIDEAVRRLIEEQYQRVKALLERVAETLLERETL--TAEEFQRVVEG-------- | |||||||||||||
7 | 2i57C | 0.10 | 0.08 | 0.84 | 0.64 | FFAS-3D | -AQDVVARE-NDRRASALK--------------------EDYEALGANLADIEAVTAKVEKWGTGEPRGIFDKLDDCAVIQQLTRAWDKADPKELKARGDAL---GLGFDAMNSNTFSDAPGQAHS-----------------YKYGSLSHTNAATRAQAVEHNLECIEIGKAIGSKALTVWIGDFERYLSAMAEIYKGLPDDWKLFSESTVVQDWGTNYLIAQTLGPKAQCLVDLGHHAPTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLLFLVFNELVDAEARG-----------------VKGFHPAHMIDQSHNVTD-PIESLINSANEIRRAYAQALLVDRAALSGYQEDNATETLKRAYRTDVEPILAEARRRTGGAVD-- | |||||||||||||
8 | 6lfzA | 0.10 | 0.09 | 0.92 | 0.63 | SPARKS-K | GMGHLLPYLRLAAMLHSRGCAVSVISAHPTISDAESRSLSSFFSLESIGNSIHLLRPLLASLS-PPLSAIFPVLTEFSPIAADFSLIV--TSARFFSLMAHLPRLL------EQEDDISKK-----SEVCVPHLDPIQVSSIPPQMLDRRHFFVETITSNVASLSYAVEALKRNGVDHILPIGPLEAIKAEESDLPWLEEQAPKSVLFISFGAHTKEQLREFAAALEKSWRFLWVLKSGKVDREDKEETEDILGNRGVVIKGWADQEHSAIGGWNSVVEAAKLGVP----VLAWPGDQRVNAEVVEKVGLLWVRGWGWAGER------LIGRDEIAEKLIELRND--ERLRERVKEVREKAREER--ESGGISETLIRDLIHSL---- | |||||||||||||
9 | 2g47A | 0.10 | 0.08 | 0.79 | 0.86 | CNFpred | NMAYLYLELLKDSLNEY-GLSYDLQNTIYGMYLSVKGYND------KQPILLKKIIEKMATFEID-EKRFEIIKEAYMRSLNNF---AEQPHQHAMYYLRLLMT-EVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGN---------TKQAALGIMQMVEDTLIEHATKPLLPSQLVRYREVQL----------DRGWFVYQQRNEV-------------HNNCGIEIYY-------------------QTDMQSTSENMFLELFCQIISEPCFNTLRIVFSGPRRANIQGLRFIIQS----------------PPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKP----LSAECAKYWGEIISQQYNF | |||||||||||||
10 | 4bgdA | 0.06 | 0.04 | 0.71 | 0.67 | DEthreader | SPEKWDITTRNS----------NNLAIVELV-L---LIIDEIHLVLESIVARANLAEVVIRLKVLYDEATDLGNIASINHASM---EEFNRLLRAMFEICLKRGMILYY-------INIQAASAAFFSKVVLIILGITMYFPLPTE-SYLQYIIHDTLCLNDLVESSFI---------TLSNGLIA-SHY-GVS----------------TLKNMLYVLS-TAV-EF--ESVPLLSPLRFPEHTS-----S-GS-VSFKVFL---LQ--AYFSRL-ELP-VDFQNDLKDILEVVAMDLAQM---------LIQGVWD------VDNPL-RQI-HFNNKI---------------------IMALEDERDEILTLT-Q---VAFVYTSE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |