Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TFDTLFMVSSIDELGRRQLTDTIRKDLRLSLAKFSIACTKTSSFSGTAARQRKRGAPPQRTCVPRSNKSLQMFVLCKRANAAQVREQLRAVIRSRKPRKYYTRSSDGRLCPAVPVFVHEFVSSEPMRLHRDNVML |
1 | 1vfjA | 0.11 | 0.07 | 0.69 | 0.90 | DisCoVER | | --MKLIVAIVRPEK----LN-EVLKALFQAE--VGLTLSRVQGHGGETE--RVETYRGTT-VKMELHEKVRLEIGVSEPFVKPTVEAILKAA--R---------------------------TGEVGDGKIFVL- |
2 | 1m5sA | 0.02 | 0.01 | 0.69 | 0.83 | DEthreader | | AGIAGGNFFIFGDSTALTAAEAAVDTIAELE-GTITPFVSGSK---------------IENT--EIPAVYEIVINGLDESIKAAMKAGIKAAVTVPGV---------------------GNYGGQFKL---HELF |
3 | 6mm2A | 0.08 | 0.06 | 0.72 | 0.89 | CEthreader | | QQVWKLVIIT-----EEILLKKVSKIIKEA--GASGYTVLAAAGEGSRNVRS-----TGEPSVSHAYSNIKFEVLTAS--RELADQIQDKVVAKYFDDY--------------SCITYISTVEAL---------- |
4 | 4r25A | 0.09 | 0.07 | 0.81 | 0.87 | EigenThreader | | SHMFKVEIVTRP---A--NFEKLKQELGKIG--VTSLTFSNVHGCGLQKAHTE--LYRGVKIESNVYERLKIEIVVSKVPVDQVTETAKRVLK----TGSP---------GDGKIFVYEISNT----INIRTGEE |
5 | 3o8wA | 0.13 | 0.09 | 0.66 | 0.24 | HHpred | | ----MKMVVAVI---RPEKLECVKKALEE--RGFVGM----TVTEVKGRGEQKGI-R-----LVDLLQKTKVEVVVSDDAVDEVVEAIVSSARTGKFGRIFVIPVEKS--------------------------- |
6 | 4bqqA | 0.16 | 0.10 | 0.60 | 0.42 | MRFsearch | | ---NMIIVYDVSRFSRLKVMDAIPIVSELLALGVTIVSTQEGVFRQG--------------------NVMDLIHLIMRLKSAKILDTKNLQRELGAPYGFELVS------------------------------- |
7 | 6e0mA2 | 0.16 | 0.13 | 0.81 | 0.43 | FFAS-3D | | -------VSTTEDLKCQNAITQITAALRAKFGN-RVTIFLQGSYR--------------NNTNVRQNSDVDIVMRYDDANFDELKADTEEALRNVFTTSVERKNSNRITADVIPCFVLKRFSTLQIKFYSDD--- |
8 | 2gjvA | 0.10 | 0.09 | 0.88 | 0.62 | SPARKS-K | | -----------NAMETLSVIHTVANRLRELNPDMDIHISKVYIPTGQQVGSVFAEPENTDATVQKQLIRISATVIVPISDAINALDRLRRSLGGIELPDCDRPLWLESEKYIFCRYALDMTASTLFIAEQ----- |
9 | 1u8sA | 0.12 | 0.08 | 0.69 | 0.60 | CNFpred | | --HLVITAVGTDR---PGICNEVVRLVTQA--GCNIIDSRIAMF----------------------EFTLLMLISGSPSNITRVETTLPLLGQQHDLITMMKRTSPHDHQTHAYTVEVYVES------------- |
10 | 3a15B | 0.08 | 0.06 | 0.76 | 1.00 | DEthreader | | LQVVMGYLGVQFQRAALQAMRDIVAGFD-LP-DGPAHHDLTHHIDNQ-----------------G-YENLIVVGYWKDSSQHRWSTSIASWWESEDRLSD-----------GLGFFREIVAPQFETPGGDRNID- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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