>PF03356 (188 residues) MDKTTLTVNGLELDYAREKEAKGIQAAKKSTLCFFLFILAVSVLLLWFQVSDNSILSELV KYTRIKNNIKGWRPLVESKTKLESDKGRLLAAGRDDLLSFHCVDFGQYILPIRLDRKTFL PQSIRRGIGDGWMIRKASKVDPSAQQFCEYLIKNKSDNIITCGINMMDEIGYSGYFMDSH WCNDFHNL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MDKTTLTVNGLELDYAREKEAKGIQAAKKSTLCFFLFILAVSVLLLWFQVSDNSILSELVKYTRIKNNIKGWRPLVESKTKLESDKGRLLAAGRDDLLSFHCVDFGQYILPIRLDRKTFLPQSIRRGIGDGWMIRKASKVDPSAQQFCEYLIKNKSDNIITCGINMMDEIGYSGYFMDSHWCNDFHNL | |||||||||||||||||||
1 | 3c9hB1 | 0.08 | 0.06 | 0.76 | 0.57 | DisCoVER | AQVAVF-P----ALSG-------------KTDAQTLVVYSSLDEPLATP---------M--IEGF---QKAPD-IA--VH-YE--DM-LTGEIYDRITADFAFSSAMDLQVKLSNDGYAQRSPAWANWRNTAYALTFEVVM-SRIGLV-PEA---AANPGYLGQTIMARQLQIPAVSAPVPVSPGL-- | |||||||||||||
2 | 2yevA | 0.03 | 0.03 | 0.76 | 0.83 | DEthreader | ----TAFFAFALAFSQILTL--HGATMLFFFIIQAGTGFGNFVVPLML-GARVALPRVNAFSYWAFLGAILLLFSSLLGNANFVAIVWSVLPLGILAGAGWWKMTG------------MYDELGHGLVWIYTMWKSL---RSGPKA--PD-NPWGGYTLEW----PP-KAHNF--------------- | |||||||||||||
3 | 4knaA2 | 0.07 | 0.07 | 0.98 | 0.44 | CEthreader | VFASRNPGTNERVWEGASASADRRAFAAWSALDLDARCTIVKRFAALLVERKEALATMIGRETKPLWEARTEVASMAAKVDISITAYHERTGEKRAPMADGVAVLRHRPHGVVAVHLPNGHIVPALIAGNTVVFKPSELAPGVARATVEIWRDAGLPAGVLN---LVQGEKDTGVALANHRQIDGLFF | |||||||||||||
4 | 1mu2A | 0.07 | 0.06 | 0.82 | 0.68 | EigenThreader | QKEIW----TVNDIQKLVGVLNWAAQLYEAELEENRIILSIRLLAQVVQKIGKEALVIWGEIWEQWWDNYDPI-------------------PGAETFYTDGSCNSKEGKAGYVTDRGK-----------DKVKKLEQTTNQQAELEAFAMALTDSGPIIVDSQYVMGIVASQAWVPAHKGIGGNQEV | |||||||||||||
5 | 3jc8Na | 0.13 | 0.09 | 0.70 | 0.32 | HHpred | ----MIRINLLPVRAVKKREM----GRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKINTRKAEVEKKLAVLDALRPVRMMDALATPKKVWVKTFSEN-------------NNAVSIDGSAVSHDEVAEFMRGLNG----------------------------------- | |||||||||||||
6 | 5ochA | 0.13 | 0.10 | 0.71 | 0.57 | MRFsearch | ---REEERYGAELEACRCRAEELGRGIALFQGLSNIAFNCMVLGTLFITG--GDLMSFLVASQTVQRSMANLSVLFGQVVRGLSAGARVFEYMARGSVTFQNVCFSEVLKDFTLTL------------GKIVALVGQS--GGGKTTVASLLER----------------------------------- | |||||||||||||
7 | 3jc8Na | 0.09 | 0.07 | 0.85 | 0.50 | FFAS-3D | -----------RINLLPVRAVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQGVASTKARIAELEKIIGEVKNINTRKAEVEKTPKKVWVKTFSENNNAVSIDGSAVSHDEVAEFMRG-------LNGVVWTPKGMGRLVDRRRDSKTARTSDATIEEFPEAQVSPFFKN---------- | |||||||||||||
8 | 3b21A | 0.09 | 0.08 | 0.86 | 0.63 | SPARKS-K | ---------NVNVKKLLESLNGDMDKDSELAATLQKMICSGCALHACMAMLGYGVREEISEY--MTGFFHRHLEQIETYSKFRERIAENILQNSKGSVVMISIEQATHWIAGFNDGEKIMFLDVQTGKG--FNLYDPVEKSPDA--------FVDENSSVQVIHQEFDHYANSSSWKSKRLC------ | |||||||||||||
9 | 4a2wA | 0.11 | 0.07 | 0.62 | 0.60 | CNFpred | --------------------EEESRICRALFICTEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKD------------TNENPKLE---ELVCILDDAYTRTLLFAKT----RALVSALKKCMEEN--------------------------------- | |||||||||||||
10 | 3p8cB | 0.08 | 0.06 | 0.73 | 0.83 | DEthreader | THMSTHELCPE-ERHHIGDRSLSLCNMFLDEMAKQARNLITDICTEQCTLSQLLIMTMIAKPLYTNWYLETLRQSHISQVAELKKLVVENVDVLLRLSSVD---------MTIIGLLLMVVALS-YSPIEGHCN------------FLALASSS------------DKTTTR---------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |