Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | LLLLLLLSASASHETEQNDSVSPRKSRAAAQNSAEVVRCLNSALQVGCGAFACLENSTCDTDGMFDICKSFLYSAAKFDTQGKAFVKESLKCIANGVTSKVFLAIRRCSTFQRMISEVQEECYSKLDMCGIARRNPEAITEVVQLPNHFSNRYYNKLVRSLLECDEDTVSTIKDSLMEKLGPNMASLFHLLQSDHCAQ |
1 | 1puoB | 0.08 | 0.05 | 0.54 | 0.68 | DisCoVER | | TCPIFKVNAPERTAMKK-------IQDCYVENGLISRVLDGLVMTTISSSKD----------CM-EIC-PAVKRD--------VDLFLTVAQYKALVVLENARLKNCVDAK-----MTEEDKENALSLLDK----------IYTSPLC----L--------------------------------------------- |
2 | 6qj3A | 0.06 | 0.04 | 0.73 | 0.83 | DEthreader | | ----------------------PDAILQLLTLHALSKLFDLITYGFLWTLTAAEAKAAEK-----------------TSERDTFIGLLTRP-VY-IL---------SEQRVKNTSIRHAFKVLC--AVKHGHGYAAQVSIVQNLTYFEHLSEPAEF-LHILAYDYPQLADEVLRELSNKEFPKVSAF-IRLSELAPRL |
3 | 6v9iC2 | 0.07 | 0.07 | 1.00 | 0.52 | CEthreader | | VEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDSEKYVEQLLTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDKCPELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVNKDVFMRYHKAHLTRRLEIEENMVEWLREVGMPA |
4 | 6nuwH | 0.06 | 0.06 | 1.00 | 0.65 | EigenThreader | | LHNLHLWQFSFLQKWITPLVIWQATTPVDVKPWKLSIIKLILQRFQCLVGASSQITESIITINCNRKTLKSLDAHFLSEQLAQNWPQLHIPNDVDYMMKPSLNSNVLPRKVMSRDSLKHLYSSIPYEWCIWQLKRCFAHQIETPQEVIPIIISVSDNKLSSRIKKVCGGILPLWKPELISFMASIFMWSTRDGHDNNC |
5 | 4uetA | 0.10 | 0.05 | 0.50 | 0.24 | HHpred | | ----------------------------------------------------ALKK--KSPELGEKLHAMVKSKIAALGPEAKGFAEKSIEIARGIKARYYTGNEPTKDDLKASVKEVLKL------YKAMSDAGKADFGKQFPLAKVFESGKAAKFAG--------------------------------------- |
6 | 3m1iC | 0.09 | 0.07 | 0.82 | 0.38 | MRFsearch | | --ALLDQVVSTFYQG----------------SGVQQKQ--------AQEILTKFQDN----PDAWQKADQILQF-----STNPQSKFIALSILDKLITRKWKLLNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVWPEFIPVNVCENNMIVLKLLTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSS |
7 | 3ljbA | 0.10 | 0.10 | 0.94 | 0.70 | FFAS-3D | | --FLIDKVNAFNQDMQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQNFVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDVSIKNFEEFFNLHRTAKSKIEDIRAE-----QEREGEKLIRLHFQMEQIVMEEIFQHLMAYHQEASKRISSHIPLIIQQQLQKAMDTYSWLLKER---- |
8 | 5cwjA | 0.11 | 0.08 | 0.75 | 0.73 | SPARKS-K | | ---------------------------DSEEEQERIRRILKEARKSG------------TEESLRQAIEDVAQLAKK-SQD-----SEVLEEAIRVILRIAKESGS--EEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESG--SEEALRQAIRAVAEIAKEAIRVIRQIAEESGSEEARRQAERAEEEIRRR |
9 | 3gb8A | 0.06 | 0.05 | 0.91 | 0.69 | CNFpred | | VKRETLKLISGWVSRSNDPQMV-------------AENFVPPLL---DAVLIDYQRNVPA--REPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEEYPEHRTNFFLLLQAVNSHCAFLAIPPTQFKLVLDSIIAFKHTMRNVADTGLQILFTLLQNEEAAAQSFYQTYFCDILQHIFSVVTDTSHTA |
10 | 5gupl | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | -----------LPLFGQEMI-IS-W----TLQTVEL------------------A--NNLFQLFIGWEGVGIMSFLLIALQAILYNRIGDIGFVLSMAWFLTHSNAWDLQQIFNPLIGLLLAAAGQGLHPWLPSAMSLHSTMVVA--VFLLIR-YQ-TLLGAITTLFTALAAFSTQHFKMGATGFYSKDLIIEAVNSY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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