>PF03292 (657 residues) MEYNVNDIFLNSKLNLGKEYNNQLLLLNGNHIHQPTPSSSCGICNSLSNFSSEEYIHAGV RSRSIKRKITSSKEKDDICKQTKKPDNVEMVPIDEVASTHDWHLRLRKDGDAIARYLTEN KCNVSNFTIQDMLNIMRKLNIIRSNRNEIFELLSHVKSSLSNSSMSVKSTHPLVLIHSHA HPKIGEQLRELDKIYSPSKYEMLLSTTRFQSIHFTDLSSSVDLAFHYKSCDSTYFIHPIF VALFGIKLPALENTFVYGDSYSLLQQLYDFKKVKPDNYMLLVNRLTEESPIVFTGISDVI STEIQRAYIHTMIRKIIMNIRMGIFYSKDEEAVDPYLMKIIHTNCSQVMTDEEQMLASIL SIVGFKPALVSIPKPGSVNSYDMHLQSVPYIVIDPMKMITTSNCPISINSGNIYSLTFDG NSGRVVFAPPSIGYRMYSNNPLDNNFHCGTIANNHSHSPVIVNGVLMFYVERRQHKNTFG GECYTGYRSLINDSPIDVSQEIVINGIMYRLRSAVCYKLGDQFFETCSSVNNSISADIFL KGHYTILFTEMGPWMYDPLSIFNKSSRDARMIRAMKNHYRKLNNQVDDTDFYEWIKGEGS QYAMSKQQMLMNHITMFEDDILTMEEAISLISRQCCILIYAQDYEPYITAKNMTELF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | MEYNVNDIFLNSKLNLGKEYNNQLLLLNGNHIHQPTPSSSCGICNSLSNFSSEEYIHAGVRSRSIKRKITSSKEKDDICKQTKKPDNVEMVPIDEVASTHDWHLRLRKDGDAIARYLTENKCNVSNFTIQDMLNIMRKLNIIRSNRNEIFELLSHVKSSLSNSSMSVKSTHPLVLIHSHAHPKIGEQLRELDKIYSPSKYEMLLSTTRFQSIHFTDLSSSVDLAFHYKSCDSTYFIHPIFVALFGIKLPALENTFVYGDSYSLLQQLYDFKKVKPDNYMLLVNRLTEESPIVFTGISDVISTEIQRAYIHTMIRKIIMNIRMGIFYSKDEEAVDPYLMKIIHTNCSQVMTDEEQMLASILSIVGFKPALVSIPKPGSVNSYDMHLQSVPYIVIDPMKMITTSNCPISINSGNIYSLTFDGNSGRVVFAPPSIGYRMYSNNPLDNNFHCGTIANNHSHSPVIVNGVLMFYVERRQHKNTFGGECYTGYRSLINDSPIDVSQEIVINGIMYRLRSAVCYKLGDQFFETCSSVNNSISADIFLKGHYTILFTEMGPWMYDPLSIFNKSSRDARMIRAMKNHYRKLNNQVDDTDFYEWIKGEGSQYAMSKQQMLMNHITMFEDDILTMEEAISLISRQCCILIYAQDYEPYITAKNMTELF | |||||||||||||||||||
1 | 2y9yB | 0.06 | 0.04 | 0.68 | 0.74 | DisCoVER | -ALIPSNWTSVILLNMKPVPYAIIKLM---AFINKFSSLQN-LS--F-------QDFEVGLD--LYP-GDPNGSA--AGIVKGPEDTSLLLYPIVYC-------------------------------------------------------------------------QDKMNLLFL----------------SLLDL-TFTENFDGKKGPLTTWENLVFSPLYRLRLVAREWG--YPREWR-QQL-ISKPKTALFEQDEQTPVVDPSHPIPNIYT--WN-ANEP------------------LP-LESNPLYNREMDKNGILALPMDRVVLLRALTWCASHSSAIHDEIYKLTHGKKDPVFGQTQQVPRYTIEGVDNTQFKLCSLIQSRY-------------EIRSKKKHFVKQLKEGKKPDLRKLEIELLFSLYDKWPLFEGELPDQPLANPFRLYK--LRLQEFFLGRV-------------------------------PHIGDFYMPRLHSYGEMSTYNAFTLFENDGQSMSAQFKLFYHDTPYWYELCHDSATLLEFLEFLDYKIVK-PQDE-NKPSINTNPL--P--------------KDAKYNTARKKLQ---ILKEFL---SDYYFILRQF--EQMKFADPQL- | |||||||||||||
2 | 1vt4I3 | 0.06 | 0.05 | 0.91 | 1.20 | CEthreader | ------------------------------------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW---NASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------ | |||||||||||||
3 | 5ganJ | 0.06 | 0.05 | 0.77 | 0.88 | EigenThreader | PRSSDIWLENIRLHESDVHYCKTLVAT---AINFNPTSPLLWFKAIDLESTTVNKYRVVRKALQEIPRDEGLWKLAVSFEADKAQVIKML---EKATQFIDLLTAYTNLQSKMTLNSFRKILPQEPEIWIISTLLEERNNPKLVSLLKEGLLELSKN--------GYKATLS------------AWLKRAEALNDAPNSNLTCQAIVYAI-----LEWLRESG-------EYESELNNVDQILEKHSKVQIAVLKKLIQWDRLKMATESYEELLAFFQELLFQTSDDIRANMREKSPGLLMMYVSEYWKAQQTLVLIDQIIDFAPH--NLDLRFFKIKLLGRSLQLDELRDFFQQTFSSLEDFKISGT----------------------------------------ERLYYK--------------YVNFLRYQDLNEEAIKFLNERCLKSFPICHKF-------FLQLGQIYHSMGNIEMSRETYLSGTRLVP------------------------------------NCPLLW---VSLSKIDEIDLKNAKIQMEIRLGNLDQAELLVTQALQKF-----PSNALLWVEQIKLFKHGALRRTRVLLEIGVSFYAEAQYETSLKWLERALKKC-----SRYGDTWVWLFRTYA | |||||||||||||
4 | 1vt4I | 0.14 | 0.07 | 0.52 | 0.57 | HHpred | FEDAFVDNFDCKDV--QDMPKSILSKEEIDHIIMS--KDAVSGTLRLTLLSKQEEMVQKFREQRQPFAKYQLRPALDVCLSYKSRSDHSSNIKLRIHSIQELRRLLKSKPYQNAKAWNAFNLSCKRFQVTDFLSAATTTTLTPDEVKSLLL------KYLDCRPQDLLTTNPRRIIKHVNCDKLTTIIESSLNVLEPAEYRKMHIPTILLSLIWFDVIKSDVSLVEKQPKESTISIPSIYLELKVKLYALHRSIVDHYNI---PKTFDSDDIPPYLDYFYLEQKIRHDSTAWNA-SGSI----LNTL-QQLKFYK-PYICDNDPKYERLVNAILDFLPKIEELICSKYMAEDEAIFEEAHKQVQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 5cvmA | 0.13 | 0.05 | 0.40 | 0.57 | MRFsearch | -------------------------------FGLVNFGNTCYCNSVLQALY-------------------------------------------FCRPFRENVLALLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDMQQDAHEFLNYLL---------------------------NTIADILQEEKKQ----ELTWVHEIFQGTLTNETRCLNCETVSSKDED-----------------------------SITHCLRDFSN------------TETLCSEQKYYCETC-------------------------------------------------------------------------------------CSKQEAQKRMRVKK------------------------------------------------------------------LPMILALHLKRFKYMEQL-------HRYTKLSYRVVFPLELRLFDRMYDLVAVVVHCGS-----------------GPNRGHYITIVKSGFWLLFDDDIVEKI----------------------------------------------------------DAQAIEEFYGESGYILFYQSR-------------- | |||||||||||||
6 | 1yvlB | 0.11 | 0.08 | 0.76 | 0.79 | FFAS-3D | -----------------------------------------SQWYELQQLDSKEQVHQLYDDSFPMEIRQYLAQEKQDWEHAANDVSFATIRFHDLLSQLDDQYSLQHNIRKSKRNLQDNFQEDPIQMSMIIYSCLKEERKMLDKQKELDSKVRNVKDKV---------------------MCIEHEIKSLEDLQ--DEYDFKCKTLQ---------------NREHDQKQEQLLLKKMYLMLDNKRKEVVHKIIELLNVTELTQNALINDELVEWKRRQQSACIGGPPN----ACLDQLQNWFTIAESLQQVRQQLKKLEELEQYTYEHDPITKNKQVLW--------DRTFSLFQQLIQVVERQPCMVLKTGVQFTVNYNLKVKVLFDKDVNERNTVK-GFRKFNILGTHTKVMNMEESTNGAEFRHLQLKEQGPLIVTEELH-------------------SLSFET------------------------------QLCQPGLVIDLETVVVISNVSQLVAEPRNLSFFLTPPCARWAQLSEVLS----WQF--SSVTKRGLNVDQLNMLGETRFCKENINDKNFPFWLWI--------ESILELIKKHLLPLWNDFISKERERALLKDQGTFLLRFSEVEPYLSAVTFPD-- | |||||||||||||
7 | 6e5oY | 0.11 | 0.09 | 0.86 | 0.81 | SPARKS-K | EMDEKGYTNYFGRCN-VAEHEKLILLAQLKPVKDSDEAVT----YSLGKFGQRALDFYSI----HVTKESTHPVKPLAQIAGNRASGPSDACMGTIASFLSKYQDIIIEHQKVVKGNQKREYPSVTLP---------PQPHTKEGVDAYNEVIARVRMWVNQKLDDAKGFPSFPVVRRENEVDWWNTINEVKKLIDRDMGRVFWSGEKRNTILYNYLPNEND---HKKRENPKKPA--------------------KRQFGDLLLYLEKKYW--GKVFDEAWERIDKKIAGLTSEDAQS------KAVLTDWLRAKASFVLERLKEMDEKEFCEIQLQKWYGDLRGNPFEAEN------------RVVDISGFSIGSDGH---SIQYRNLLAWKYLENGKREFYLLMNYGKKGRIRFTDGTDIK---KSGKWQGLLYGGGKAKVIDL---TFDPDDEQLI----ILPLAFGTRQGREFIW-----------NDLLSL-------ETGLIKLANGRVIEKTIYNKKIGRDEPALFVALTFERREVVIGVARGEIALTDPEGIGEGYKEKQRAIQAAKEVEQRRAGGYS-RKFASKSRNLADDMVRNSARDLFYHAVTFANRTFQYTKMEDWLTAKLYLSKTLAQYTSKTCSNCGFTIT | |||||||||||||
8 | 6h02A | 0.09 | 0.04 | 0.39 | 0.74 | CNFpred | ---------------------------------------NQIGYRVLERIGARALVAHVRTF---------------------------DFLVYEFSTSA--GQQLNKCIEILNDMVWKYN----IVTLDRLILCLAMRSHEGNEAQVCYFIIQLL------------------LLK---PNDFRNRVSDFVKENSPE-NDWHTKHMNYHYPEKLYFEGLAEQPVQIQSPYLPIYFGNVCLRFL-PVFDIVIHRFLSKSLETLLDHLGGLYKFHDRPVTYLYNTLHY-----------YEMHLRDRAFLKRKLVHAIIGSL--KDNRPQGWCLSDTYLKCAM--WVPDDTYYCRLIGRLVDTMA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 5a22A | 0.05 | 0.03 | 0.64 | 0.67 | DEthreader | --ADYNLNSPL---------ISDDIDNLI--F-PIPSMWDSKNWDGVLTNICISEGWDRNLLKDII------LS-V----------SEQDIFSLNICLKLMKLARESRPVSGYAICIAQYKTKK-SRNVVELQGALNQMVSN---------QS---------------FRGVIRGLE----TKRWSRVVNATVAAENPINAMFLIR-SVHCPDGI-VSSRGPLPAYLGSKSFASTLTRLMAT-----------------G------------------------RIRGRGFLKGLLDGLMRASCCVYGLIYLIDKLSVSP----------------P--FL-----------SLTRSGPIRDELETIPTSY------------------YPPWGRERILH--GIHYRDFLSCDMTAALLRENVHSRGIFNWYFLRLKAGLGLQIDLIVNYVILLIYK-----------QTEFSSSQTINESWKAFQSSEQEFARKKTYFTLTGIPSQFIPDP-----------------------------------S--YMATGIFWYQQCLAVIQQSF-P-IRWEAVSVYKQKWSTRGD--GL------PK--DTR----ISDSLAPIG-NW--IR--S----LELVRN----------L---LC | |||||||||||||
10 | 5n8oA | 0.12 | 0.11 | 0.94 | 0.67 | MUSTER | GKTGFIENVYANQIAFGRLYREKLTEVVGKHMGVPVEAFS---PEIRMAEWMQTLKETGFDIRAYRDAADQRTEIRTQAPDVQSERKVQFTYTDVLARTVGILPVIERARAGIDEAISREQLEKGLFTSGIHVLDELSVRALSRDIMKQNRVTVHPEKSVPRTAGYSDARPSLAIVSGQGAAGQRERVAELVMMAREQGREVIAADRRSQMNLKQDLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAARVLITDSGQRTGTGSALMAMKDA-GEQRPATIISEPDRNVRYARLAGDFAASVKA-----EESVAQVSGVREQAILTQAIRSELKTQGV------------LGHPEVTMTALSPVWLDSRSRYLRDM-Y----RPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLD-----SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQSVSETVVVPGRAEPASLPVSFTALKLENGWVETPGHSVSDSTQMAMNATLNGLARSGRDVRLYSSL-----DETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHLPVLESKMVDLLTEAKSFAAEGTGFTELGGEINAQ---LLYV-DVAKGYGTGLLVASY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |