Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MSWSINLGSGSGDNFKTLDEIRAHVKSTTETAIADDIFPEDIKIPSPKQSKTKRITTPRKKPVPKTSKKKEEELLPPPYKEEVKESEEEEEEEAVVEESPKSHQESTSNTQNTTPMTDTRDTMDTSDLKLVTEQIIKEMKALNAKVSAVSTILETIQAASVGRQYTMLTKNIEELRMLVVCGKEQVVRKKTRHTT |
1 | 1u89A | 0.09 | 0.05 | 0.60 | 0.61 | DisCoVER | | QAQLGVGAATAVTQALNE--LLQHVKAHATGAGPA-GRYDQA-T--------------TILTVTENIFSS-----------------------------------------------MGDAGEMVRQARILA--QATSDL-----VNAIKADAEGE---SDLENSRKLLSAA-KILADATAKMVAAKAAAPDS-- |
2 | 2v45A | 0.08 | 0.06 | 0.74 | 0.67 | DEthreader | | G------NVDGNPRLCMSAIIGSN-VADPHVA-FR-PG--TDLAFMMA--IELDNPFWQRYVNF----------MDAEGKPSDFEYKAFLEN--YRPEAPVEQIYGAARAESATHTGQICFRAV-IW--M--RP-AK-GAAEE--LTSMRVIVEINSDVCRPGLIA--LFLDATD-PVSRE-------------- |
3 | 1vt4I3 | 0.02 | 0.02 | 0.90 | 0.52 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG------------------- |
4 | 2tmaA | 0.06 | 0.06 | 1.00 | 0.63 | EigenThreader | | LELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKL |
5 | 6sihA | 0.08 | 0.06 | 0.75 | 0.34 | HHpred | | -DYNSETGT--KGTLSEVNSIRSSILADLFDSQVVMLSMQDFGLSLND---------------AGTLSF-DSSKFEQ---KVKEDPD-------S---TESFFSNGKGIFSKKATLQEMTG--KDGSITKYDESLTNDIKSLNTSKDSTQAMIDTRYD-TMANQWLQYESILNKLNQQLNT-------------- |
6 | 6gapA | 0.14 | 0.06 | 0.41 | 0.40 | MRFsearch | | --------------ESRVSALEKTSQIHSDTI--------------------------------------------------------------------------------------LRITQGLDDANKRIIALEQSRDDLVASVSDAQLAISRLEIGALQTVVNGLDSSVTQLGARV---------------- |
7 | 4iaqA2 | 0.16 | 0.05 | 0.33 | 0.52 | FFAS-3D | | -----------------------------------------------------------------------------------------------------------------------------ADLEDNWETLNDNLKQVKDALTKMRAAALDAQMKDFRHGFDILVGQIDDALKLANEGKVKEAQA------ |
8 | 5mqfK | 0.05 | 0.05 | 0.95 | 0.85 | SPARKS-K | | PYFDQGYEAPGVRE-AAAALVEEETRRYRPTKNYLSYLTA---------PDYSAFETDIMRNEFERLAARQPIAWQECVNNSMAQLEHQAVRIENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLREMESNWVSLVSKNYEIERTIVQLENEIYQIKQQHGEANKENIRQ |
9 | 4aurA | 0.06 | 0.03 | 0.49 | 0.49 | CNFpred | | ---------------SRINDLKNAATEILKTNVPEVLLVKT-------------------------------------------------------------------------------------GMDVVKDIVIQRVTLASRHLDELNTFVEKNDMHRFSNDIKQSRIEVKRLAGELFEELNLMEKQLMSQLR |
10 | 6jlbA | 0.07 | 0.04 | 0.62 | 0.83 | DEthreader | | ------------------------------------------------------------------------RFKKARNTKKEGDLIAAQARLKDLEALLNSKEAALSTSEKLEELHDLRGQVAKLEAALGEAKKQLQDEL-RRVDAENRLQT-KEELDFQKNIYSEELRETKRRHETRLVEIDNGKQREERLAL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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