Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | QTTIAYSLHHPRASLTSALPDAAQVVHVFESGTRAVLTRGRARQDRLPRGGVVIQHTPIGLLVIIDCRAEFCAYRFIGRASTQRLERWWDAHMYAYPFDSWVSSSHGESVRSATAGILTVVWTPDTIYITATIYGTAPEAARGCDNAPLDVRPTTPPAPVSPTAGEFPANTTDLLVEVLREIQIS |
1 | 2a5zC | 0.03 | 0.02 | 0.86 | 0.70 | DisCoVER | | KLKLSTLTTIATSDFYASYD-FNISLLSTGNISLQFGVQPIVSSTTANASFLAGLSLEVTVYFKTPSAFPAQLTVIGSTSIG--LGISDRSGLIIENGNAFGGIVKETGSTLSTSTWYICKFKRFKVTLYSDHIGFKTQC------KTATAGISL-----------I--SID--LI-EFKAKVS- |
2 | 1ulvA1 | 0.06 | 0.05 | 0.77 | 0.83 | DEthreader | | -------------WTGVGTSLN-YTLMSLQRESTVELADPLSYRQTTTRLTKTYVTDRSTVMLGVTFEVYQLFVLSDPSSG-------DTGSLALVSS-VGFGAVALGQIPLATEFSLALGFG-DTALTASGYKKSK--T--GARTYDLAGDEAARVEFQGHFPTSRVDG--------------- |
3 | 6tv2A | 0.09 | 0.09 | 1.00 | 0.56 | CEthreader | | SLARVEGLGDLSHASLVFSRDQRYAYVFGRDGGLTKLDQRIDKRLIQGGNSIGGAISQDGRLVAVSNYEPGGVKVFDSLELVAEIPATRLPGQDRNSRVVGLVDAPGQRFVFSLFDPYDALISPDGRYYMAGLFGEDGMAQLDLWHPERGVRRVLGDYGRGQRKLPVYKMPHLEGWTIASDQAFV |
4 | 4unmA2 | 0.07 | 0.06 | 0.94 | 0.73 | EigenThreader | | NTIHAALLPTPSDLFCTLANGNLLIAGGTGIRDAFEFDPVAEDPMHEARWYPTLTTLGDGKILSVSGLDDIYMVIGDGPSLEKYPQASILPDSVLVSGGQARLYTNEFERVARNYHSGSILLPDGRLMFFGSDSLYA----DKANTKPGKFEQRPYLYRDSRPDLSGGPQTIAR--------GGS |
5 | 6k6wA2 | 0.11 | 0.09 | 0.81 | 0.27 | HHpred | | ---------------------------KKNKDIRIIPLGGVG---EIAKNMYIVEVD--DEMFMLDAGLMFPEDFLTHGEHAIYVLEQIDAPVYGSKLVRYYTVNHDSIMRF-KNVNVSFFNTHDSLGVCIHVYTGEFKFDQSLHGYAPDLKEGVFALISDSTEAESHGCMEE-LKMMLNIMKP- |
6 | 3azcA | 0.16 | 0.07 | 0.45 | 0.48 | MRFsearch | | --------------------------------------------------RSLAQGIGDPTYVIVTEDHQIANYGLNAVHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPLALVKATVTEDDKLVFTPWT---------------------------------------------------- |
7 | 6vbu91 | 0.12 | 0.10 | 0.79 | 0.43 | FFAS-3D | | EQAIDICIVSFIQSA-------SSVFVLGERNFFCLKDNGQIQFMKLDYSPSCFLSEGTINTLIGNHNNMLHIYQ----DVTLKWATQLPHVPVAVRVGCL----------HDLKGVIVTLSDDGH--LQCSYLGTDP--------------SLFQAPKVESRELNYDELDMELLQKVIKNVN-- |
8 | 6tjhA1 | 0.09 | 0.09 | 0.93 | 0.59 | SPARKS-K | | TEKWRFKTGKAIEASPVIGED-GTIYVGSNDGHLYAINGTEKWRFKTGKAITIYVGSNDGHLYAINPDGTE-KWRFKTGKAIEASPVIGEDGTIYVGSNDLYAINPDGRFKTGKAIEASPVIGDGTIYVGYAINPDGTEKWRFKTGKAIEASPVIGEDGTIYVGSNDGHLYAIN----------- |
9 | 3bwsA | 0.07 | 0.04 | 0.56 | 1.00 | CNFpred | | --GFVETISIP---------HNELWVSQMQANAVHVFDLKTL------AYKATVDLTKWSKILLYDP-IRDLVYCSNW----------ISEDISVIDRKTKLEIR---KTDK-IGLPRGLLLSKDGKELYIAQFSA------------------------------------------------- |
10 | 6jx7A | 0.07 | 0.05 | 0.76 | 0.67 | DEthreader | | -----VYN----NIPN-VH-------DVRE-H-------------NS---DGVWDQIDRVGLLIAIHGTLMVLQDGVE--------A--SQPHVAVKICHWFDVN-LGDGGQCVFNQRFLDTVLANDFYYTKVWVVNDNNTAFFSTIAYTNYTDDPRMLTAQAAIVITYATDGFNSMAAGLLFFH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|