Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | QHQRPSQYYDIDECVEIFGLGEWEEWRECLMLLCTALSLNYDDIEHYTVKRNGLLVKLVDEKTVNEWERKSREKRLRLSDLKKLSDGIGNVNNVDGDDKVKVFAAAPTKFKLLLHTVRKTLPNFKYIWIGKRGVMARHRSRSQIHVIKNETDI |
1 | 2ykoA | 0.11 | 0.09 | 0.82 | 1.00 | DEthreader | | ESLQEIWDYVKRPNLRLIGVPESDKLENTLQDIIQNFNLANVQIQEIQRTPRHIIVRFTKVE-KEK-LRAAREKGRVT--LKG---------K------PIRLTVDLSETLQARREWGPIFNIKEQPRISYPKLSF--------IKYFIDQLR |
2 | 2ykoA | 0.11 | 0.10 | 0.86 | 1.00 | DEthreader | | EQLQEIWDYVKRPNLRLIGVPESDKLENTLQDIIQNFNLANVQIQEIQRTPRHIIVRFTKVE-KEK-LRAAREKGRVT--LKG---------------KPIRLTVDLSETLQARREWGPIFNILKPRISYPAKLSFIS---EGEIKYFIDKQL |
3 | 2ykoA | 0.11 | 0.09 | 0.84 | 1.70 | HHpred | | QSLQEIWDYVKRPNLRLIGVPESDVEKNTLQDIIQEFNLANVQIQEIQATPRHIIVRFTKVEK-EK-LRAAREKGVT-------------------LKGKPIRLTVSAEARREWGPIFNIEKNFQPRISYPAKLSFISEGEIK--YFIDKQ-L |
4 | 2ykoA | 0.12 | 0.10 | 0.84 | 1.15 | MRFsearch | | --LQEIWDYVKRPNLRLIGVPESDKLENTLQDIIQENFPANVQIQEIQRTPRHIIVRFTKV--EKEKLRAAREKGR------------------VTLKGKPIRLTETLQARREWGPIFNILKNFQPRISYPAKLSFISE--GEIKYFIDKQLR |
5 | 2ykoA | 0.11 | 0.09 | 0.84 | 3.31 | HHsearch | | QSLQEIWDYVKRPNLRLIGVPESDVEKNTLQDIIQEFNLANVQIQEIQATPRHIIVRFTKVEK-EK-LRAAREKGVT-------------------LKGKPIRLTVSAEARREWGPIFNIEKNFQPRISYPAKLSFISEGEI--KYFIDKQ-L |
6 | 2w7aA | 0.13 | 0.07 | 0.50 | 1.80 | HHsearch | | ----------GAGNLRLIGVPESDVENNTLQDIQENFPNANVQIQEIQATPRHIIVRFTKVEK-EK-LRAAREKGVTL-------------------KGKPIRLTVD---------------------------------------------- |
7 | 2vdcA1 | 0.08 | 0.07 | 0.85 | 0.83 | DEthreader | | --R--QKFFKDNKLAVGQVFLPQEARCIVETE-IL---AF-GYYIYGWRQEIEQIIVGNNGVSDEQFELDLYIIRRRIEKAVKGEQ---INDF-----YICSLSARSIRFESDFA-IYH--NALAMTDG---RWVVGGMDRGMIAVDLQSGKL |
8 | 4mt1A | 0.08 | 0.06 | 0.75 | 0.83 | DEthreader | | --------VA-APTITLHAEVLSVIERNMNG---------VEGLDYMSTSAGSVSLTFTPDTDENLAQ-VE----QN--KL-SEVL--STLPATVQQYGVTVSKARSN---FLM-I-VMLSANVELIVLSGNATAVERLAVL------DTSKF |
9 | 2w7aA | 0.12 | 0.06 | 0.49 | 0.93 | HHpred | | ----------GAGNLRLIGVPESDVEKNTLQDIQENFPNANVQIQEIQATPRHIIVRFTKVEK-EK-LRAAREKGVT-------------------LKGKPIRLTV----------------------------------------------- |
10 | 2ykoA | 0.11 | 0.09 | 0.84 | 0.80 | DisCoVER | | -LQEI-WDYVKRPNLRLIGVPESDNGTKLEQDIIQENFLANVQIQEIQRTPRHIIVRFTKV-EKE-KLRAAREKGRVT--L---------KGKP-----IRLTVDLSAETLQARREWGPIFILKFQPRISYPAKLSFISE-GEIKYFIDK--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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