Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEESTQKISWVPDPKTGYYRPETGSNEIDAAELRAALL |
1 | 4xc6A | 0.07 | 0.06 | 0.88 | 1.00 | DEthreader | | RELDTVRAYHRRVVAQSKLARERQQLRAHDMLQGGHE--SAALETLASERDVS-LGAVELMLNSFYVPLSFF-GR----RRIAVMRDKYG--- |
2 | 2bkwA2 | 0.14 | 0.09 | 0.60 | 0.62 | DisCoVER | | SVSAHGLTAVY----------VADPPDVIAFLK-------------SHGV-----------VIAGGIHKDIGPKYIRIGHTCFDLIKLA--L- |
3 | 5d06A | 0.08 | 0.06 | 0.84 | 0.83 | DEthreader | | ---------GLPHFSTNYCWGDVFIS--LRGLLLTTGRY--EEAKEHILAFAKTLPARDAGTWMPNTIVDRVGMRTLHGPEWETQASTGCL-- |
4 | 5mdnA2 | 0.09 | 0.09 | 1.00 | 0.61 | CEthreader | | KEVAESVTAFARAILLDVVEYAKRLGIEVIYGDTDSLFVKKSGAVDRLVKYVEERHGIEKDYERVLFTEAKKRYAGLLRDGRIDIVGFDWCEL |
5 | 6jqlA | 0.03 | 0.03 | 1.00 | 0.58 | EigenThreader | | EDVTPDQPEFALFIREVVREMTTKAGQKCDALVARLQLVNAEQRADVQEKVNILLAAGGGGSLAHGRPLPQLVHGGAGGGEELGGLRAVKHYM |
6 | 2r18A | 0.15 | 0.11 | 0.70 | 0.25 | HHpred | | ------------------ISKKM-ETMGIFATPEWVALNGHRGPSPGQLKYWQNTR--------EIPDPNEDYYVHAEKSRLASEEQILRAA- |
7 | 6g03A | 0.23 | 0.16 | 0.71 | 0.53 | MRFsearch | | -------DEKQQARFELGVSMVIYK-----------------WDALDVAVENSWGGPDSAEKRDWITGIVVDLFKN---EKVVDAALIEETLL |
8 | 1v74B | 0.12 | 0.10 | 0.84 | 0.38 | FFAS-3D | | MN-KMAMIDLAKLFLASKITAIEFSERICVERRRLYGVKDLSPNILNCGEE------LFMAAERFEPDA-------DRANYEIDDNGLKVEV- |
9 | 5eqwA | 0.14 | 0.12 | 0.86 | 0.74 | SPARKS-K | | ---------DYAGGVLAILTQYFNNVGYPLAGEEANSREGINQKEIVHRRASEPIRQGRGFHDAYVYFAS----VPENAPPNSAQSEVQAKLT |
10 | 2zzeA | 0.13 | 0.08 | 0.56 | 0.58 | CNFpred | | ------HTKALTFMLADGVVPSNVMAGYLARLLIRK-----------------------------------SIRHLRELGLEVPLSEIVALHI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|