>PF03222 (400 residues) KSPSLLGGAMIIAGTAIGAGMLANPTSTAGVWFIGSILALIYTWFCMTTSGLMILEANLH YPTGSSFDTIVKDLLGKSWNIINGLSVAFVLYILTYAYITSGGGITQNLLNQAFSSAESA VDIGRTSGSLIFCLILAAFVWLSTKAVDRFTTVLIVGMVVAFFLSTTGLLSSVKTAVLFN TVAESEQTYLPYLLTALPVCLVSFGFHGNVPSLVKYYDRDGRRVMKSIFIGTGLALVIYI LWQLAVQGNLPRTEFAPVIEKGGDVSALLEALHKYIEVEYLSVALNFFAYMAISTSFLGV TLGLFDYIADLFKFDDSLLGRTKTTLVTFLPPLLLSLQFPYGFVIAIGYAGLAATIWAAI VPALLAKASRQKFPQATYKVYGGNFMIGFVMLFGILNIVA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | KSPSLLGGAMIIAGTAIGAGMLANPTSTAGVWFIGSILALIYTWFCMTTSGLMILEANLHYPTGSSFDTIVKDLLGKSWNIINGLSVAFVLYILTYAYITSGGGITQNLLNQAFSSAESAVDIGRTSGSLIFCLILAAFVWLSTKAVDRFTTVLIVGMVVAFFLSTTGLLSSVKTAVLFNTVAESEQTYLPYLLTALPVCLVSFGFHGNVPSLVKYYDRDGRRVMKSIFIGTGLALVIYILWQLAVQGNLPRTEFAPVIEKGGDVSALLEALHKYIEVEYLSVALNFFAYMAISTSFLGVTLGLFDYIADLFKFDDSLLGRTKTTLVTFLPPLLLSLQFPYGFVIAIGYAGLAATIWAAIVPALLAKASRQKFPQATYKVYGGNFMIGFVMLFGILNIVA | |||||||||||||||||||
1 | 5oqtA | 0.15 | 0.14 | 0.95 | 1.50 | DEthreader | RKLGAFDLTMLGIGAIIGTGIFVTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLL-SGEL---PKALTSADLPAIIIVLFITFLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVKPENW-TPFM-PY--GFSGVATGAATVFFAYIGFDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIVPYEQL---N---VKN-PVAFALNYI-HQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAISRKVFAIQVPYVNTWLTGAAVAVFAGII--PLNKLAELTNIGTL-FAFITVSIGVLVLRKTQPDKRFRVPFVPVVPILAVLFCGYLVLQ | |||||||||||||
2 | 5oqtA | 0.15 | 0.15 | 0.95 | 1.33 | DEthreader | KELGAFDLTMLGIGAIIGTGIFLTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLL-SGEL--PKALTSAIDLPAIIIVLFITFLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVK-PENWTPF--MPYGFSGVAT-GAATVFFAYIGFDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIVPY---EQLN----VKNPVAFALNYI-HQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAISRPKVFAQVPYVNTWLTGAAVAVFAGII--PLNKLAELTN-IGTLFAFITVSIGVLVLRKTQPDKRFRVPFVPVVPILAVLFCGYLVLQ | |||||||||||||
3 | 5oqtA | 0.17 | 0.16 | 0.96 | 3.00 | HHpred | KELGAFDLTMLGIGAIIGTGIFVLTGVAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLLSGELPKALTAYGTFIDLPAIIIVLFITFLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVKPENWTPFM----PYGFSGVATGAATVFFAYIGFDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIVPYEQLN-----V-K-NPVAFALNY-IHQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAISRDGLSPTRPYVNTWLTGAAVAVFAGIIP--LNKLAELTNI-GTLFAFITVSIGVLVLRKTQPDRAFRVPFVPVVPILAVLFCGYLVLQ | |||||||||||||
4 | 6f2gA | 0.15 | 0.14 | 0.94 | 0.86 | DisCoVER | ----GITALTVVVGTVIGAGIFFKPTAVYGAGPGLGLLAWFVAGIITIAGGLTVAEIGTIYPQTGGMMIYLEKVYGRWLGFLVGWAQMIYYPANIAALAIIFATQFVNL--------FALSDSTIVPTAILTSIFLMGVNFLGTKYSGWIQTLATILKLIPLVVIIVAGLYGGGVIRLVPFSV-ETHPVLTSFGSALIATLFAYDGWINVGTLAGEMKNPGKMLPKVIIGGLSIVMAVYLLTNIAYLFVL-D--SSQLA---GTDTPAALVAS-HLFEGIGSKLVTIGILISVFGGINGYIISGLRVPYALAMFARITNLPINGGLVMLGIAIVMILTGQ--FNQLTDLIVFVIWFFIT-LTFIAVIILRPDI-ERPYRVPFYPVIPLIAIIGGLYIIN- | |||||||||||||
5 | 5oqtA | 0.15 | 0.14 | 0.96 | 0.33 | MRFsearch | --LGAFDLTMLGIGAIIGTGIFVLTGVAAAEAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLLSGLTSAYDPAKGTFIDLPAIIIVLFITFLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVKPENWTPF----MPYGFSGVATGAATVFFAYIGFDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIVPYEQLN--------VKNPVAFALNYIHQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAISRDSPTRQVPYVNTWLTGAAVAVFAGII--PLNKLAELTNIGTLFAITVSIGVLVLRKTQPDLKRAFRVPFVPVVPILAVLFCGYLVLQ | |||||||||||||
6 | 3l1lA | 0.13 | 0.12 | 0.93 | 2.13 | SPARKS-K | HKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDP------WVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFR-----GETYMAA------IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPN-------AALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGNKAGTPVAGLIIVGILMTIFQLSSISPNATLVSSVSVIFTLVPYLYTCAALLLLGH--GHFGKARPAYLAVTTIAFLYCIWAVVG | |||||||||||||
7 | 5oqtA | 0.16 | 0.15 | 0.95 | 1.45 | MAPalign | -ELGAFDLTMLGIGAIIGTGIFLTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLALTSAYDPAKGTFI--DLPAIIIVLFITFLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVKPENWTPFMPY----GFSGVATGAATVFFAYIGFDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIVPYEQL---N----VKNPVAFALNYI-HQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAIFARISPTRQVPYVTWLTGAAVAVFAGIIP--LNKLAELTNI-GTLFAFITVSIGVLVLRQPDLKRAFRVPFVPVVPILAVLFCGYLV-- | |||||||||||||
8 | 5oqtA | 0.16 | 0.15 | 0.97 | 0.95 | CEthreader | KELGAFDLTMLGIGAIIGTGIFVLTGVAAAHAGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLLSGELPKALTSAGTFIDLPAIIIVLFITFLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVKPENWTPFMP----YGFSGVATGAATVFFAYIGFDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIVPYEQLNV--------KNPVAFALNYIHQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAISRDGLLPKVRQVPYVNTWLTGAAVAVFAGIIPLNKLAELTNIGTLFAFITVSIGVLVLRKTQPDRAFRVPFVPVVPILAVLFCGYLVLQ | |||||||||||||
9 | 5oqtA | 0.16 | 0.15 | 0.97 | 1.44 | MUSTER | KELGAFDLTMLGIGAIIGTGIFVLTGVAAAEHGPALVLSFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLLSALTSAYDPAKGTFIDLPAIIIVLFITFLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVKPENWTPFMPYG----FSGVATGAATVFFAYIGFDAVSTAAEEVRNPQRDMPIGIIVSLLVCTLLYIAVSLVLTGIVPYEQL--------NVKNPVAFALNYIHQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAISRDSPTRQVPYVNTWLTGAAVAVFAGIIPLNKLAELTNIGTLFAFITVSIGVLVLRKTQPDLK-RAFRVPFVPVVPILAVLFCGYLVLQ | |||||||||||||
10 | 6f2gA | 0.16 | 0.15 | 0.95 | 2.96 | HHsearch | --VSGITALTVVVGTVIGAGIFFKPTAVYGAAGGLGLLAWFVAGIITIAGGLTVAEIGTIYPQTGGMMIYLEKVYGRWLGFLVGWAQMVIYYANIAALAIIFATQFVNLFAL--------SDSTIVPTAILTSIFLMGVNFLGTKYSGWIQTLATILKLIPLVVIIVAGLLYGGGVRLVPFSV-ETHPVLTSFGSALIATLFAYDGWINVGTLAGEMKNPGKMLPKVIIGGLSIVMAVYLLTNIAYLFVLDSSQLAGT-----D-TPAALVASHLFE-GIGSKLVTIGILISVFGGINGYIISGLRVPYAWFARINPKTLPINGGLVMLGIAIVMIL--TGQFNQLTDLIVF-VIWFFITLTFIAVIILRKTQPDRPYRVPFYPVIPLIAIIGGLYIIFN | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |