Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SMVGIIQENGGWFEVKSISSLDGFDYVTEIICANGEIYNDDGMGDDYFELSEEEFYCFREYKEPTSEEDEVKDKVSGVTKIHCIVDENNVDEIIELLRKTFKK |
1 | 1y7pB1 | 0.11 | 0.06 | 0.52 | 0.65 | DisCoVER | | LRG-LR--IIAENKLTTIIAEE-GGNITFAGKALI-YFE-------IEGGDFEKIRVKDYI---------------------------I--EI--EE------ |
2 | 1xcrA | 0.08 | 0.07 | 0.83 | 0.83 | DEthreader | | DLNKIAKKLPGAFILG---G--FNSEFMPVIQTESPVNYSKCH--DFQCALL-AN-LFASGQPGKVI-EVKAFIILVCLPVFLPAE---FLY--RI--DQ-PK |
3 | 2plqA | 0.09 | 0.09 | 1.00 | 0.64 | CEthreader | | IFAEACKKADTWGVFSLTGEKHEPYNTLVLINNKGEIVQKYRKITYVTEGPKGLKISLIVCDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKEQQIMMAKAMA |
4 | 3alpA | 0.07 | 0.06 | 0.85 | 0.52 | EigenThreader | | DVVLHCSFAVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLLTLYEPEVTIEGFDGNWYLQR---MDVKLTCKADANPPAT------------E |
5 | 4dgkA | 0.18 | 0.17 | 0.93 | 0.32 | HHpred | | GMIKLFQDLGGEVVVSHMETTGN--KIEAVHLEDGRRFLTQASNVLYFGLNHEDFSLY--LHAPC-VTDSSL-APEGCGSYYVLAANLDRDRIFAYLEHYMP- |
6 | 3p24A | 0.26 | 0.20 | 0.80 | 0.53 | MRFsearch | | ---MIILKDNGFNRQVHVSMD----KRTKIQLDNENVRLFNGDKDSTNFILGDEFAVLRFYRN--------------GESISYIAYAQMMNEIAEFYAAPFKK |
7 | 6ituA | 0.13 | 0.13 | 0.96 | 0.44 | FFAS-3D | | ---EALSKHFIPYNAKFLGSTEKIPKVELQISIYGVKILEPKTKEVQHNCQLHRISFCADDKTDKRIFTFCKDSESNKHLCYVFDSEKCAEEITLTIGQAFD- |
8 | 1kafA | 0.18 | 0.16 | 0.86 | 0.82 | SPARKS-K | | LMLKLLDKNG--FVLKKVEIYRSNYLAILEKRTNGI---------RNFEINNNNMRIFGYMMEHTDIGMSCKIAKNGNVYLDIKRSAENIEAVITVASEL--- |
9 | 1kafA | 0.16 | 0.14 | 0.85 | 0.62 | CNFpred | | LMLKLLDKN--GFVLKKVEIYRSNYLAILEKRTN---------GIRNFEINNNGNMRIFGYKMMEHHIQKFTDI-NGNVYLDIKRSAENIEAVITVASEL--- |
10 | 3fvyA | 0.04 | 0.03 | 0.80 | 0.83 | DEthreader | | --LDCRAFLRAYSRWYGGVLTNYKS---LVQLKAKLYYIGFI-EEGFFGIPKLIVQPNTRL-EG----------S---DVQLLEYEASGLIRSFSERF-PEDG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|