>PF03181 (213 residues) FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMES IIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGNSVTLRTTQNVQGSKQNIMIGSV KGINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHGVAICHIDTS AWSQTHGAFLALGSGPGRIEVCHWIFENDLTWT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FFRESMLKTGTVMPMPDIRDKMPQRSFLPRAIVSKLPFSSSNVNVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSVLGNSVTLRTTQNVQGSKQNIMIGSVKGINGGKVTQSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPKTKAKINHGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTWT | |||||||||||||||||||
1 | 5t86A | 0.08 | 0.03 | 0.41 | 0.55 | DisCoVER | NWARNKALVGNLGAD-----------------SK-PVI------------------------------GRLVSA--GNGKVIGRQS--------------------------SDGKV-GW-----------------------RVDYDPEKGTHINIWDYSQGKPGKAVKQVIPFEGNEKS-----------------FEILLN--------- | |||||||||||||
2 | 1peuA | 0.03 | 0.02 | 0.72 | 0.67 | DEthreader | --PATPTELVSGGVAFLLSN------------PDITFLANAQMAISRYDELIADPHVRKT--YINADFFQTLEQFESGYPYIMFEDTVNA-SN-CS---EILQVNSASRYL---HDISCNLGSLNIA---------------------------LTSSHIRSVPSIAAGNANQGLSLTLFFPTATTRDINKAQIYWRKGIKSLY--------- | |||||||||||||
3 | 3gbjA | 0.09 | 0.08 | 0.99 | 0.56 | CEthreader | PMNRRETDLHTKCVVDVDANKVILNPVQPKVFAYDHCFWSMDESVKEKYAGQDI--VFKCLGENILQNAFDGYNACIFAYGQTGSGKSYTMMGTADQPGLIPRLTQKEENEEQSFKVEVSYMEIYNEKVRDLLDTLKVRPYVDGLSRSSRSHAVFKITLTHGTSGEKVGKLSLVDLAGSERATKTGKEGSNINKSLTTLGLVISALADQNKFV | |||||||||||||
4 | 2azqA | 0.03 | 0.03 | 0.84 | 0.62 | EigenThreader | EGKPRFKQIILRV--LQDTARLIEDLEITEDEFWHAVDYLNRLGGRN--------------EAGLLAAGL--------GIEHFLDLLQDAKDAEAGLGGEVRMGQVFDANGKPLATVDLWHANTQGTYPSGYGCDPQGPTQECLRHGQR--PAHVHFFISAFGHRHLTTQINFAYATRDGLAAAARD------RGVQGERFAELSFD--FRLQ | |||||||||||||
5 | 1hmcA | 0.12 | 0.06 | 0.49 | 0.30 | HHpred | ---DSQMETSCQITFEFVDQELDPVCYLK----KAF----LLVQDIMETMRFRDNTPNAIAIVQRLKSCFTKDYEEHDKACVETPLQLLEKVKNVFNETKNLLDKDIFKNCNNSFA------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5xguB | 0.10 | 0.05 | 0.54 | 0.53 | MRFsearch | -----------------------------TTETGGYHYSMEEMLQLGQHCS--MAERRADEATRDVAD-----------------WLKCDFMLDQVGNVFKGVISSVT---GFGFFVRLDDL----FIDGLVHVSSLDNDYYRFDQV---LGDRVEVRVEAVNMERKIDFSLI---------------------------------------- | |||||||||||||
7 | 4v1ai | 0.12 | 0.10 | 0.81 | 0.40 | FFAS-3D | -FVEHARKAGLVIPIHLACTAGIFDAYVPAQRAERLKKSQLSIRKIRESFKIKDFPEKAKDIFIEAHLC---LNNSDHTLVTENCFP--DMVWDIRYKTVRWSFVESLEPP----QVVQVRCSSLMNQGNIYG-------QVTVRMH----TRQTLAIMYGQEDVPRDVLEYVVFEKHLGSW------RMHGKIIPPWAP------------- | |||||||||||||
8 | 4mi7A | 0.13 | 0.08 | 0.57 | 0.68 | SPARKS-K | ------------------------------------GIDIIECENLLKEMNVQPESSLFTNIKEALQ------AEVFNSTVEDDFESFISYELQNHGP---LMLIRPSSEC---LHAECIVGYDSEVK---------------------------KVLIYDSNTSPE--------------WQSNIDVYDKLTLAFNCSICGLYYDGVYEP-- | |||||||||||||
9 | 5i04A | 0.09 | 0.07 | 0.73 | 0.68 | CNFpred | ----------------------------LKSYEEELDPRVAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG------QTVDAALAAAQTNAAATVHCDLQPVG--ERGEVTYTTSQ--------VSKGCVAQ-LEVHVLFLEFPTGPSQLELTLQASK----PREVLLVLSVNS------SVFLHLQAL---GIPLHLAYNSSLVTFQ | |||||||||||||
10 | 1cf3A | 0.04 | 0.03 | 0.77 | 0.67 | DEthreader | -----ELATNNQTALIRSGSLVNGGTWTERARAPNQIAAGH-------DTGDD-----Y--SPIVKALMSAVEDR-GVPTKK-DFGC-GDPH------------GSAV--------LRGGFLQYEYRDIVAYSELFLDTA----F-VWDL-LPFTRGYVHILLHHFAYDPQYFDLLGAAATQLARNISNETIPLYADAWTIPFPNYHGVQMSS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |