Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | LEIINLKKDIYSNYREEYLMAHNFNEDTFIKLVEDLVERSDFYSSGVEFDWAREFIEYVDCADLEIKDNQSAENLAYDLMEIDSLQKELNRIQNENKKREKPIKDRLKMLIYNITNTYPLIEQLNYKFGEFVFTLDPKKRAISDRLKGLLPTSGTVFFPSN |
1 | 1vw4R | 0.05 | 0.02 | 0.50 | 0.59 | DisCoVER | | LG---P--K--------KYEGQDV----STGEIIMRQRGTKFYPGENGIKDH-SIFALEPGVVRYY--------------------------------------------L---DPFH--PKRKFIGVALRRDLK------L------PSPHFEPTVRR-- |
2 | 2yevA | 0.06 | 0.05 | 0.87 | 1.00 | DEthreader | | ----W--VLWDLLTTVDHKKIG-L---MYTATAFFAFLAFILTLHGATMLFFIIQAGLGFGVVPLARDVALPRVNAFSYWAFLGAIVLALMSYFFGGAPSWYLAILLLGFSSLLG--NANFVATI--------IYV-WSFAASLNPTVMLFHVGSGGAFAF |
3 | 2npmA1 | 0.07 | 0.06 | 0.83 | 0.52 | CEthreader | | -------------------------MSDSVNARESNVYMAKLAEQAERYDEMAKYMKDVVEAERNLLSVAYKNAVGSRRSSWRIISSVEQKEHRNAEDASKMCGKYRSKVEAELTDI---CNDILTMLDKHLIPTATSPDSKVFYFKMKGDYHRYISEFST |
4 | 4jndA | 0.06 | 0.06 | 0.91 | 0.60 | EigenThreader | | GPVHDVFGDAIHDIFQKMMKRGQAVDFCHWVSHLIATEIDEKFSDKIWPAIDKILQPISVLAVFDGGHECSQYAAGHLWETWLEVRKSR--------DPSDSLEDQLRKSLELLDERMKGGSTAVCCAMDALAWLGDSP------GYVMSNIEFRQLTRGH |
5 | 5oqmh | 0.16 | 0.08 | 0.51 | 0.25 | HHpred | | -----------------------EDLCRYEDTLSKLVES----P---NLDIAKDLI----------RTDEALFENVKLLAEYDNIYRNLQKIDKDSEELDSKTRKILEILNECLGGGGGGGG--------------------------------------- |
6 | 4axzA | 0.17 | 0.12 | 0.75 | 0.38 | MRFsearch | | --DNRLRRLFYSSLDENKIKKLATSNDYHYTLIGLIFWTG--------FKIQEAFESAVNILT-----KDEQKRLIFNTKTVKEIQENFEKLMQ--------ERNSWIKIVDNIIGEYDLGEVIRVGY--------NKSMQILNNIETPLKT--------- |
7 | 2xzeA | 0.12 | 0.08 | 0.68 | 0.59 | FFAS-3D | | LPPEDRVRALSQLGSAVEVN-EDIPPRRYFRSGVEIIRMASIYSE--EGNIEHAFILYNKYITLFIEKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEELAR------------------------------------------------ |
8 | 4uosA | 0.13 | 0.12 | 0.93 | 0.64 | SPARKS-K | | EEVKKMLEKMIEEIKEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILAKEMAEKILKMVIELAEKILKKEMAEKILKKVKELEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKMLENGE------------DSEKILKKAKEMAEKILKMVIELA |
9 | 4axzA | 0.14 | 0.11 | 0.80 | 0.50 | CNFpred | | --KDNNIDFMLKDLRRLFYSSLNYDENKIKKLATILAQTSDYHYTLIGFWTGFKIQEAFESAVNIL-TKDEQKRLIFNFRTVKEIQENFEKLMQE--------RNSWIKIVDNIIGEYDK----------NTGGCKADGKILGEVIRVGY----------- |
10 | 1yw8A | 0.07 | 0.06 | 0.83 | 0.83 | DEthreader | | FR-AAAHRQVRKYVMSWI--KPGMTIEICEKLEDCSRKLIK-E-NGLNAGLAFPT--GCSAHYDDITFNPKYDTLLKAVKDATNTGIKCA--GI--DVRLCDVGEAIQEVMESY-EVEYVSTGGVHDCSYPPLCDI-----T--AQ--FEHTILL------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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