Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | RAYGSFDDVMEVYQQIVTESIQLKRLHFGSGCLIEFLGDSGTCETFCGGWISMICWTSDTNSMGSLTVDIGIDDGKYKTYNARGFLLCSKSITSISQNTEGRDRILTVSQENNKLQITFVTLTKVFKEHDIRNLGDPKCIEKFEKECRALDRKKHDDEHRKRSGKQKEKRKVEDTDKKKDDDRRKQEERKRNDEDKQPDKKEESDELPKEKRQKYHDMKRNLEEQSHE |
1 | 4qdcA2 | 0.06 | 0.04 | 0.69 | 0.74 | DisCoVER | | SWKSLRIKGSH-CREIV-DNVVDMAHFFYI---------------HYSFPRYFKNVFEGHTATQYMHSTGRSGTNPNAELRSEATYFGPSYMIDWLESDATIETILINCHYPEFVLQYGAIVKKL----------------SDEIAAGMA-----EQ-FAEGV-------------------GFEQD---E---DGPVQLRRWYQQF---MTK-RFEFEIDTTRAV-- |
2 | 5a7mA | 0.06 | 0.05 | 0.77 | 0.67 | DEthreader | | ----SQGQP-LNVWNEADAISAPNVNFRSLWGRGQE----TPGEDA---SSAYTYIIQGDLAATVKHFAGYFDAIITLYTFAASRSLM---C--LQLLRESWGFYVSSDCDAVYNV-SL-A--------------D--CGQTYPWHLNESEVSEIERSVT--RLYANLVRLGYFDKKNQYRSLGKDVVKTDAWNISYAATTQMQGNY---Y---GP-APY-------- |
3 | 1vt4I3 | 0.06 | 0.06 | 1.00 | 0.54 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 2p0mA | 0.05 | 0.04 | 0.90 | 0.67 | EigenThreader | | -------------------GVYRVCVSTGAVELWLVGQH--GGSCLRPTEEEFKVNVSK--YLGSNWISVQALGAAEDKYWFPCYRWVVGTLFEADFALLLAAPLVMLKLQPDGKLMPMVIQLHLPKIGCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGLLGVESSFYAQDALRLWEIISRYVQ |
5 | 6em5m | 0.12 | 0.06 | 0.47 | 0.40 | HHpred | | -----------------CSQRYVRIYDLSQQILVKKLL-------PGARWLSKIDIHPRGDNSKRVLWDLDLASTPYKTL--RYH---EKAVRSVNFHK--KLPLFSSAADDGTIHVFHATVYLTGHKLGVLDAIWHP------------------------------------------------------------------------------------------ |
6 | 3sc7X2 | 0.13 | 0.06 | 0.43 | 0.48 | MRFsearch | | -------------------VLSLAVRKGAEQTVIKYTQSDATLSVDRGGVHTAKLEE---DGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSD-----SSDGLALEVTGGNAVLQSVDVRSV------------------------------------------------------------------------------------------------------- |
7 | 3q0xA | 0.08 | 0.06 | 0.76 | 0.63 | FFAS-3D | | --------------------FDLATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLE---VSEEDFQSLKNDQGSPRFQAVLTIRGGESVFKIVEINDEKQLPAFRPGNDSVVKQFLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKHLLEVQ------------------------------- |
8 | 3q0xA | 0.11 | 0.09 | 0.80 | 0.86 | SPARKS-K | | ------------------FDLSTATTLFWRPVPVHVKQQDRE-DVLEELTFRILTGVAKQHNLRILRIHISSDSDLFFLHTLEVSILVDGKIISLLEKGDSPRFQAVLTIRGGESVFKIVEIND-EKQLPHITLAFRPGNDSVVKQFLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKHLLEVQ-------------------------- |
9 | 5jowA | 0.07 | 0.03 | 0.37 | 0.90 | CNFpred | | ----------------------------EASAPVVLQKAG-------NDEAGISVFMEF---HSHYDLFVRQDKDRKRSVGLRYKLGEITHYAKEVSLPTDGEVELVVKSDINYYYFGYKVN---------------------------------------------------------------------------------------------------------- |
10 | 2ycuA | 0.02 | 0.01 | 0.72 | 0.83 | DEthreader | | TVIANPIEA-GNAKTVK----SSRFGKIANITYLLEKS---EFRVLNDGILDIAINYAFSVLHYA-YKESL----SRLMA----------------LSNTN-PSFVRCIV-K---------GIICRPNEGQSKIF-FRAGVLAQLEEERASEQTKSDYLKRANELVQWINDKQASL-ESE-AQSN-SD-LLSILAQLTELNYVPELTKDT------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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