>PF03064 (228 residues) RAYGSFDDVMEVYQQIVTESIQLKRLHFGSGCLIEFLGDSGTCETFCGGWISMICWTSDT NSMGSLTVDIGIDDGKYKTYNARGFLLCSKSITSISQNTEGRDRILTVSQENNKLQITFV TLTKVFKEHDIRNLGDPKCIEKFEKECRALDRKKHDDEHRKRSGKQKEKRKVEDTDKKKD DDRRKQEERKRNDEDKQPDKKEESDELPKEKRQKYHDMKRNLEEQSHE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | RAYGSFDDVMEVYQQIVTESIQLKRLHFGSGCLIEFLGDSGTCETFCGGWISMICWTSDTNSMGSLTVDIGIDDGKYKTYNARGFLLCSKSITSISQNTEGRDRILTVSQENNKLQITFVTLTKVFKEHDIRNLGDPKCIEKFEKECRALDRKKHDDEHRKRSGKQKEKRKVEDTDKKKDDDRRKQEERKRNDEDKQPDKKEESDELPKEKRQKYHDMKRNLEEQSHE | |||||||||||||||||||
1 | 4qdcA2 | 0.06 | 0.04 | 0.69 | 0.74 | DisCoVER | SWKSLRIKGSH-CREIV-DNVVDMAHFFYI---------------HYSFPRYFKNVFEGHTATQYMHSTGRSGTNPNAELRSEATYFGPSYMIDWLESDATIETILINCHYPEFVLQYGAIVKKL----------------SDEIAAGMA-----EQ-FAEGV-------------------GFEQD---E---DGPVQLRRWYQQF---MTK-RFEFEIDTTRAV-- | |||||||||||||
2 | 5a7mA | 0.06 | 0.05 | 0.77 | 0.67 | DEthreader | ----SQGQP-LNVWNEADAISAPNVNFRSLWGRGQE----TPGEDA---SSAYTYIIQGDLAATVKHFAGYFDAIITLYTFAASRSLM---C--LQLLRESWGFYVSSDCDAVYNV-SL-A--------------D--CGQTYPWHLNESEVSEIERSVT--RLYANLVRLGYFDKKNQYRSLGKDVVKTDAWNISYAATTQMQGNY---Y---GP-APY-------- | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.06 | 1.00 | 0.54 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 2p0mA | 0.05 | 0.04 | 0.90 | 0.67 | EigenThreader | -------------------GVYRVCVSTGAVELWLVGQH--GGSCLRPTEEEFKVNVSK--YLGSNWISVQALGAAEDKYWFPCYRWVVGTLFEADFALLLAAPLVMLKLQPDGKLMPMVIQLHLPKIGCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDFGIFDQIMSTGGGGHVQLLQQAGAFLTYRSFCPPDDLADRGLLGVESSFYAQDALRLWEIISRYVQ | |||||||||||||
5 | 6em5m | 0.12 | 0.06 | 0.47 | 0.40 | HHpred | -----------------CSQRYVRIYDLSQQILVKKLL-------PGARWLSKIDIHPRGDNSKRVLWDLDLASTPYKTL--RYH---EKAVRSVNFHK--KLPLFSSAADDGTIHVFHATVYLTGHKLGVLDAIWHP------------------------------------------------------------------------------------------ | |||||||||||||
6 | 3sc7X2 | 0.13 | 0.06 | 0.43 | 0.48 | MRFsearch | -------------------VLSLAVRKGAEQTVIKYTQSDATLSVDRGGVHTAKLEE---DGTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSD-----SSDGLALEVTGGNAVLQSVDVRSV------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3q0xA | 0.08 | 0.06 | 0.76 | 0.63 | FFAS-3D | --------------------FDLATTLFWRPVPVHVKQQDREDVLEELTFRILTGVAKQNHNLRILRIHISSDSDLFFLHTLE---VSEEDFQSLKNDQGSPRFQAVLTIRGGESVFKIVEINDEKQLPAFRPGNDSVVKQFLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKHLLEVQ------------------------------- | |||||||||||||
8 | 3q0xA | 0.11 | 0.09 | 0.80 | 0.86 | SPARKS-K | ------------------FDLSTATTLFWRPVPVHVKQQDRE-DVLEELTFRILTGVAKQHNLRILRIHISSDSDLFFLHTLEVSILVDGKIISLLEKGDSPRFQAVLTIRGGESVFKIVEIND-EKQLPHITLAFRPGNDSVVKQFLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKHLLEVQ-------------------------- | |||||||||||||
9 | 5jowA | 0.07 | 0.03 | 0.37 | 0.90 | CNFpred | ----------------------------EASAPVVLQKAG-------NDEAGISVFMEF---HSHYDLFVRQDKDRKRSVGLRYKLGEITHYAKEVSLPTDGEVELVVKSDINYYYFGYKVN---------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 2ycuA | 0.02 | 0.01 | 0.72 | 0.83 | DEthreader | TVIANPIEA-GNAKTVK----SSRFGKIANITYLLEKS---EFRVLNDGILDIAINYAFSVLHYA-YKESL----SRLMA----------------LSNTN-PSFVRCIV-K---------GIICRPNEGQSKIF-FRAGVLAQLEEERASEQTKSDYLKRANELVQWINDKQASL-ESE-AQSN-SD-LLSILAQLTELNYVPELTKDT------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |