>PF03053 (223 residues) MFLGLFQYTIDTAVEHTVEHANLSQEEALMLEENIVPLRQATHVTGFLLTSVFVYFFALF KASSYKRNLLLFLARLLALLIYAPILIFCGAYLDAFIVVATLTSRLLFLTYYSWRYKTYK FLIYNSSTLMFLHGHANYYNGRPYVMLEGGSHYVTLGTDIVPFVSRNNLYLAIRGSAESD IQLLRTVELLDGNYLYIFSSCQVVGVTNSGFEEIQLDEYATIS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | MFLGLFQYTIDTAVEHTVEHANLSQEEALMLEENIVPLRQATHVTGFLLTSVFVYFFALFKASSYKRNLLLFLARLLALLIYAPILIFCGAYLDAFIVVATLTSRLLFLTYYSWRYKTYKFLIYNSSTLMFLHGHANYYNGRPYVMLEGGSHYVTLGTDIVPFVSRNNLYLAIRGSAESDIQLLRTVELLDGNYLYIFSSCQVVGVTNSGFEEIQLDEYATIS | |||||||||||||||||||
1 | 6mitC | 0.05 | 0.03 | 0.62 | 0.67 | DisCoVER | -----PTYKSD--HS-DTVVY-SPEGAL--N---Y--RL-IAQ-HVEYFSDDGI--SW--F----------------TQPVMTTF--DK--DK-VPTWSI------------K----SDRAKLTNDRMLYLYGHVEVNALTSQLRKITT-----DNA-----QINLVTQDVTSQDLV---------TLYGTTFNSS-----GLRMRGNLRSKNAELIEKVRT- | |||||||||||||
2 | 5kf6A | 0.08 | 0.06 | 0.79 | 0.67 | DEthreader | --------------APAPFADFAPPELASLTEALRESAAMKWTALPQL--G--AA-WAVPPSERAACLDRAAELMQMTLLGLIIRAGK--SA-LNAIAEVREAIDFLRYYAEQTRRTLHPLPIVCISPFGQI-AAV-LVATAGVFTGSTEVRETGG-NA-SREVF-----GLTGNLYIRNIGAV---------------VGVQPFGGRLSGTGPKGGPLPGPG | |||||||||||||
3 | 3gzkA2 | 0.07 | 0.07 | 1.00 | 0.56 | CEthreader | WLLTMQDPATGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQPFGDAELRDELLWASCALLRMTGDSAWARVCEPLLDLDLPWELGWADVALYGVMDYLRTPRAAVSDDVRNKVKSRLLRELDALAAMAESHPFGIPMRDDDFIWGSNMVLLNRAMAFLLAEGVGVLHPAAHTVAQR | |||||||||||||
4 | 3ln6A | 0.09 | 0.09 | 1.00 | 0.70 | EigenThreader | SGIHYNLGLQELLTSLFELSQADNAIDFQNQLYMKLSQNFLRYRWLLTYLYGASPVDQDIKEANRLNDLIALSHPLSDLVDAMQSVIQHFNQDLLESVKRQIQSAGQLLEMIVIQKGVFLKLWHNSHIEYVKNEFTDRKEDKPIVVKPKLGISIFKTSALVEEYIEG-TEYRFFVLEGDCIAVLLRVANISTGGDSIDVTVCGVDLIIPNATCIELNFNPLMY | |||||||||||||
5 | 6xdcA | 0.20 | 0.13 | 0.66 | 0.32 | HHpred | --------------------------------SKIITLKK-------------RWQLALSKGVHFVCNLLLLF-----VTVYSHLLLVAGLYLYALVYFSINFVRIIMRLWLCWKCRSKYFLCWHTNC----YDYCIPYNSVSSIVITSGEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSEHVTFFIYNKIV--------------------- | |||||||||||||
6 | 6xdcA | 0.20 | 0.14 | 0.72 | 0.53 | MRFsearch | -------------------------------------LPFGWLIVGVALLAVFQSQLALSKGVHFVCNLLLLFVTVYSHLLLAPFLYLYA---LVYFLQSINFVRIIMRLWLCWKCRSKNPLLYDANYFLCWHDYCIPYNVTSSIVITSGEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSEHVTFFIYNKI---------------------- | |||||||||||||
7 | 6xdcA | 0.19 | 0.13 | 0.67 | 0.63 | FFAS-3D | ----------------------------------------------FGWLIVGVALLAVFQSASSKGVHFVCNLLLLFVTVYSHLLLVAALYLYALVLQSINFVRIIMRLWLCWKCRSKYFLCWHT----NCYDYCIPYNSVTVITSGDGEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLVEHVTFFIYNK----------------------- | |||||||||||||
8 | 4n69A | 0.13 | 0.12 | 0.92 | 0.71 | SPARKS-K | -APDEEGWVWGQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLLFLNAFSSDPSLRSAAVADLRAARERSYSHCLLNYKGFLACQAHRVAHLLWRRIANVFAVDIHPAARIILFDHATGVVVGETAVIGNN---VSILHHVTLGGGGDRHPKIGDGVLIGATILG----NIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLV---------- | |||||||||||||
9 | 3rkoB | 0.11 | 0.05 | 0.43 | 0.73 | CNFpred | TAGVYLIARTHGLFLMT--------------------PEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILA----------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 3m1cA | 0.07 | 0.06 | 0.80 | 0.83 | DEthreader | ----------RGDDG--A---------TERHPDGRRNAPPPTNYAQYMSRAYAEFLGE-DPGSGTDARPSLFWRLAGLLASSGFAFVNAAIDLLGFLHSRVLAGLAARGCAADS---------TLPFSASLRFDLAFI-AM---TAHLIRVPILVPI-HNASYVGIGYFITIEPKRLVLGLVAVFLRYTAGEVMSVLLVQLGFSSVAL-----IHLLAFD--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |