>PF03048 (190 residues) CQFNKLNTVVCQYHKVFCLYQCCQCKKYHICDGSKTCILINTGESLVCTLTGNCIFNNFQ ENTFLKQDNVKESKQQFDFTLFANILESLKQDLENYFIKSYGLEEVSKAILDNNSLKPEI CDLIRCTFQHCCHIFGEIQYGYDIICSMYIHIIISIYSTKTVYGNLLFKCTKNKKYDYIL KRMRETWMST |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | CQFNKLNTVVCQYHKVFCLYQCCQCKKYHICDGSKTCILINTGESLVCTLTGNCIFNNFQENTFLKQDNVKESKQQFDFTLFANILESLKQDLENYFIKSYGLEEVSKAILDNNSLKPEICDLIRCTFQHCCHIFGEIQYGYDIICSMYIHIIISIYSTKTVYGNLLFKCTKNKKYDYILKRMRETWMST | |||||||||||||||||||
1 | 2id3A2 | 0.09 | 0.04 | 0.48 | 0.74 | DisCoVER | --PRADGAL-----------EEDL---------------RANARLVVTLDDPRQGR-RVDEWAGCVRDAV-EVPDGTDPHGVVAAVSAPL-----------------YYALLNTGR---SLTEADADAARAASAARAGVWVT------------------------------------------------ | |||||||||||||
2 | 6a8zA | 0.03 | 0.02 | 0.71 | 0.83 | DEthreader | LDLLSPGQYSLS---E-PHGTRGFLPC-NDH-PS-DPATFTGLFTQVPTYALG-LIV---------GPLAAGLPAG--------TT---EGETARMLR-V-LS-DWF-GPY----P---DEV-YG--V--ALLPVR-PATSNRRVRLHELAHQWFDQVTL--------LSE-G--FATYAELLWAESQGE | |||||||||||||
3 | 4xuvA | 0.02 | 0.02 | 1.00 | 0.52 | CEthreader | INTMAVFLTLACVYERTRNPAYLPWLDAWAEWAYHDLARTRRGGMQHVTYLEENAGQLWDDTLMMTVLPLAKIGVVLGRPHYVAEAKRQFLLHVQYLGDVKTGLFFHGWHFATARWARGNSWVTIAVPEFLELLREAGMADEALEEFLKSTLQAQCEALRPLQVTGLWRTLEGSYQEASATAGFAFGVLK | |||||||||||||
4 | 7c0mK | 0.08 | 0.07 | 0.88 | 0.60 | EigenThreader | TDVKRKRGGS-----PAVTLLISEKISVDIT-----LALESKSSKPFYLVPKSHIEKEILNNHGKSKTCCENKEEKCCRKDCLKLMKYLLEQLKERF-------------KDKKHLDKFSSYHVKTAFFHVCTQNWDRKDLGLCFDNCVTYFLQCLRTEKLENYFIPEFNLFSSNLILTKQIEYERNNEF | |||||||||||||
5 | 1n4mA2 | 0.17 | 0.11 | 0.62 | 0.28 | HHpred | ---------------------------------------------------------------LAWLSDIKQSKTREGK---STSLSLFYKKVYRLAY--LRLNTLCERLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGKIIVTAYKDQETFKRVLI--KEEEYDSIIMQRLKTNIL-- | |||||||||||||
6 | 1n4mA2 | 0.19 | 0.12 | 0.62 | 0.48 | MRFsearch | -------------------------------------------------------------------PLFDLIKQSKTREGKSTSLSLFYKKVYRLAYL--RLNTLCERLLSEPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICIVTAYKDQETFKRVLIKE---EEYDSIIVFYNSVFMQR | |||||||||||||
7 | 2r3vA2 | 0.11 | 0.07 | 0.65 | 0.49 | FFAS-3D | ---------------------------------------------ILLTNTKV---------------------PRNTRALVAGVRNRLLKIVAPLLTSIDAISLECERVLGEEAPAPEQYLVLEELIDMNQHHLNALGVGHASLDQLCQVTRLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQALTSC | |||||||||||||
8 | 2f07A2 | 0.07 | 0.05 | 0.65 | 0.64 | SPARKS-K | --------------------------------------------------------LIPAIAENLLTHTLDQIKGRLHGDEFWTVLDILIDETFLITERHKDIVLCYSGLAIDH-SMEKWETIYQPYYSWLEKIINKSKWTARTIINLVENTAERFYIGF----------EQDENVEVYKKEIFTFLKRS | |||||||||||||
9 | 4wvfC | 0.05 | 0.03 | 0.56 | 0.58 | CNFpred | -------------------------------------------------------------------------------DVVKVLVEPLLNAVLEDYMNN-EVLNCMTTVVEKHMIPQGVILILQSVFECTLDMINKDFTEYPEHRVEFYKLLKVINEKS---FAAFLELP-PAAFKLFVDAICWAFKHN | |||||||||||||
10 | 3aqpA | 0.06 | 0.04 | 0.76 | 0.83 | DEthreader | ------VF-LGLVASLLTSLIGLLSGL-----------TLTLPGIAGLVLTLG-------------PVGF--NYSIFT-RNAVMAVLVGLGLILL-YV-------AFRF--DW-TFGVASILAVAHDVAIVAGMYSEFSPTIAALLTIVGYSINDSIVTRTMTSLTTLLILALFLAFVGIFVGTYSSIYV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |