Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SDDKPARSNPTDCSVHTEPSDANNRTGVHSGRHPREAHSQVRDLDLQFDCGGHRVRANCLFPWLPWLNCGCSLHTAEQWELQVRSDAPDCPEPTGQLQLLQASESESHSEVKHTPWWRLCTKWHHKRRDLPRKPE |
1 | 1op4A | 0.07 | 0.04 | 0.67 | 0.54 | DisCoVER | | ------------CKTGFP---EDVYSAVL--PKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKV------------------DE--------DGTVYAVRSFPLTAEQAKFLIYAQDWQVAVNLSREEIE-- |
2 | 1zvyA | 0.05 | 0.04 | 0.82 | 0.48 | CEthreader | | -------------DVQLVESGGGSVQ---------AGGSLRLSCAASGSTDSIEYMTWFRQAPGKAR--EGVAALYTHTGNTYYTFTISQDKAKNMAYLRMDSVKSEDTAIYTCGATRKYVPVRFALDQSSYDYW |
3 | 3wiqA1 | 0.05 | 0.04 | 0.96 | 0.60 | EigenThreader | | MKLSERKLEASGINEEVFCEETPGTGVFSTAQVTELVNLPNPIGLRIYINRVLNVESFIDATTGIYLGKKASSTKVLLNNQRCYFG------YEIEKLTVLVSSREKNVGDVFETCTNKLKEFETKSAEKLLFEH |
4 | 5hy7A1 | 0.14 | 0.11 | 0.78 | 0.29 | HHpred | | ---DVGYSNPVFAALEYSEAD-QDPTGQAAKQ--LEMQLVYYELDLGLNHV-VRKWS-------DTVDPTSSLLFQVPGGPGVLVCGRHSNQEAFRVPIPRRGATEDPNRKRTIVAGVM---------------- |
5 | 2pffB | 0.10 | 0.01 | 0.07 | 0.73 | MRFsearch | | ----------------------------------------------------------------------------------------------TGVRVIVAGT------------------------------- |
6 | 3cm9S2 | 0.11 | 0.09 | 0.83 | 0.31 | FFAS-3D | | ----PNLKVPGNCHFPCKFSSYEKSQDEGPSKAFVNCDENSRLVSLTLNLVTRADWYWCGVKQGHFYGEAVYVAVEERKAAGSRDVSLAKADAAPDEKVLDSGFREIENKAIQDPR------------------- |
7 | 6zu9l1 | 0.07 | 0.07 | 0.95 | 0.73 | SPARKS-K | | KAIKLTGHERPLTQVKYNKEGDKDSSYSLNGERLGTLHTGTIWSIDVDCFTKYCVTGSADYSIKLWWKSPVPVKRVSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL------- |
8 | 4fnqA | 0.06 | 0.03 | 0.47 | 0.65 | CNFpred | | ----------------------------------------AETLEIVLGDALIGLEVTLQYTAYNVITRAARFENKGGERLKLLRALSSVDFPTADYDWIHLP-------------------------------- |
9 | 2uxwA | 0.06 | 0.05 | 0.81 | 0.83 | DEthreader | | PADDLGVGITGAFCLTEIRTSA-VPSP-C------GKYYTLNGSKLWIS-N-GGLAFTVATITAFV-----V-E-RGGGITHGPP---KASNTAEVFFVRVPS--ENVLGEVSGFAMHILNNGRAKI-SLRIF-- |
10 | 2nbiA | 0.16 | 0.16 | 0.99 | 0.54 | MUSTER | | SDLNPS-SQPSECALEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATPMFTPSPDGSPPICSPTMLPTNQPTPPEPSAPSDCGEVIEECLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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