Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | NVWSPLISASCLDKKATYLIDPDDFIDKLTLTPYTVFYNGGGLIKISGLRLYMLLTAPPTINEIKNSNFKKRSKRNICMKECAEGKKNVVDMLNSKINMPPCIKKILGDLKENNVPRGGMYRKRFILNCYIANVVSCAKCENRCLINALTHFYNHDSKCVGEVMH |
1 | 2pptA | 0.12 | 0.08 | 0.71 | 0.59 | DisCoVER | | -MAESLR----L----TCLACGQAN--KVPSLAGPKCG-ICGAGLITGKVAG-IDPAILARAER------DDLPLLVDFWAPCRQMAPQ--------------------------FQA-AAATLAGRLAKIGIPAFILFHKGRELARAA-GARPASELVGFVKL- |
2 | 6wmuC | 0.07 | 0.05 | 0.74 | 0.67 | DEthreader | | G---PLSTESLSVYQVASIPF--QATRADKP----------LVGTGMRAVAVSSTLALGFMAGRHGNMNIGILHLAGIGDKINAMLEFIQRAYDLGAVRQK--VD-LSTFSDEEVMR--LA-NL--MPIATAIELLLGQTVGY-MY------------------- |
3 | 4rr2D | 0.13 | 0.13 | 0.96 | 0.98 | CEthreader | | VASSPSLSGLKLGFESIYKIPFADAL-DLFRGRKVYLE--DGFAYVPLKDIVAIILNEFRQPLLNHLSHSYTGQDYSTQGNVGKISLDQIDLLSTKSF-PPCMRQLHKALRENHHLR---HGGRMQYGLFLKGIGLTLEQALQFWKQEFIKGKMDPDKFDKGYSY |
4 | 6l5dA | 0.06 | 0.05 | 0.89 | 0.60 | EigenThreader | | ------------SSGLYLYGIFPDPIPETVTLQGVYSQIGFTFLYSEAKVLEQAMHAGFLQPYKAQLRELFQKLAREVSVKIFWDSKAELQAMMDSHQDLKQLIESNLLSRKESIIQVFFDDEVIESDIYNAAFLIPWENESIFS------QQVESIDHKFDERL |
5 | 6sdkA | 0.14 | 0.09 | 0.64 | 0.32 | HHpred | | NPYQPRK---HFDDEAELKESVLQH-G--ILQPLIVRKSLKGYDIVAGERFRAAKLAGLDTVALALENLQDLTQEQLA--KRLGSR-PHIANHLRLLTLPENIQQLIAEGTL---S-GH---------------------------------------------- |
6 | 4rr2D | 0.14 | 0.09 | 0.65 | 0.87 | MRFsearch | | ---------------SIYKIPFADALDLFRG--RKVYLEDGFAYVPL-KDIVAIILNE--------------------FRAKLSKLQPLLNHLSHSYTFPPCMRQLHKALRENHHL---RHGGRMQYGLFLKGI--------GLTLEQALQFWKQE--------- |
7 | 4ij7A | 0.13 | 0.08 | 0.67 | 0.37 | FFAS-3D | | ---------------------------------------------------GTIMMDCYKKEQTKKQLQMDGIPRGCCIAECAMKRDDLSKMFMDAVKDKPEWMSLVRDTNACFELAEKKMDEIEAGAKLEPSFEGEKICHPRCMGMMMFAQFNVNENCNK---- |
8 | 6tqpA | 0.11 | 0.08 | 0.74 | 0.53 | SPARKS-K | | --------------------------------------NSCNFNNSIKNVIVFYINEKALIEEKKMLS----CYENKLLNLIKEDCENIMLKYKPNLTSEENIKHIKDQIIESLENDNR-PSVKLSLISMIVEMNGYNIPMSFLIEDIALKISENSEDLINFINI |
9 | 5exiA | 0.11 | 0.06 | 0.57 | 0.55 | CNFpred | | ----------------------------------------GVELLIPDFRLAEVFESGP----------------EVLAHNVE-TVPRIFKRIRPAF-TYRRSLGVLTAARDA--------GLVTKSNLILGLGE-----TSDEVRTALGDLRDAGCDIVTITQY |
10 | 3btaA | 0.04 | 0.03 | 0.84 | 1.00 | DEthreader | | --------L----------------VTHELHGHYIAINRVFSFERTYKMLEIYTDNFVVLNRNFDKNWDLFFYYTMFYLRAQEFEIALTNSVNEAYTFF---SSDYVKKVNKATFLGWEQVYDFTDETEPYIGPALILELIRKKMKEALENQAEKLSKLNESINK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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