Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MASAFLAGLAGDVITNGVGSLINAGANAVNQKVEYDFNKQLQMASFKHDKEMLQSQVLATKQLQQEMMNIRQGVLTAGGFSPADAARGAVNAPMTKILDWNGTRYWAPNSMKTTSYSGQFSSSPVHKSPAPSHAVSSKSRLQNDSVSVYSSPSSVSSQSTHSTVLSAGTGSSRSISTSTATPTLSRTSDWVRGQNERLSPFMDGALQTAFVTPPSSKASSNGTVSTVPKAVLDSWTPMFNTHRQPLFAHLR |
1 | 3pwxA | 0.08 | 0.04 | 0.55 | 0.59 | DisCoVER | | YQSNIANLKT-TLSSQETHLD-SVSES-----------------L--SRDIVLWGAQDRS-GI----------------------------------TEL-YRDS---------IESS---------------------------FNAQDEEGHFLFSGTKTDTAALNKS---SGAYVVEGNSDVRVV-TV--AKGVT--D----SNTAQEILDI-----KNVLNQI-DALIAEFEFQVSLAIDTNVLAL- |
2 | 1xmeA | 0.05 | 0.04 | 0.75 | 0.67 | DEthreader | | --------LYLVLGFLALIVG-SLFGPFQALNYGNVDAYPLLKRLLPFVQS-YYQGLTLHGVLNAIVFTQLFAQAIMVYLAR---MRPNMGLMWL---------SWWMAFIGLVVALLFGAVVLTWIYVTMAIYMALA-VLMTAFTVA-------LPWDVAPGLGFGGGGIVGHFLQSL------MG-SLY-WLLPNLTG--------GLAVV------------LWFLGMMMAGIVLLV--LLFIYGL-- |
3 | 1jp4A | 0.07 | 0.06 | 0.91 | 0.46 | CEthreader | | ----------HNVLMRLVASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFP------------KLTIIGEEDLPEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLDNVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAFGFQLKEAPAGKHIITTTRSHSNKLVTDCIAAMNPDNVLRVGIIQLIEGKASAYVFAS |
4 | 3ugmA | 0.06 | 0.06 | 0.98 | 0.62 | EigenThreader | | TPDQVVAIASKQALETVQRLLPVLCQAHKQALETVQRLLPVLCQIASNGGKQALETVQRLLPVLCQVQQLLPVLCQAHGLTPDQVVAIASNIGASNGGGHGLTIASNGGGKQALETVQRLLIASNIGGKQALETVQRLLPVLCQAHGLTPAQVVAIAS------HDGHGLTPDQVVAIASNGGGKQALETVQRLLPGLTQEQVVAIASNNGAHGLTPDQVVAIASNGGGKQALETVQRASNIGGKQALETV |
5 | 2wodA | 0.13 | 0.09 | 0.69 | 0.37 | HHpred | | ALGAFLGLAVGDALGAT---------------VEFMTKGEIAQGQITDDTEM--------------SLALGRSLAAKGTLDVADICE--------EFALWLKSRPVDVGNTCRGIMHEG----TTTAPSEGDAGNGAAMRCLP--AALATLGADLEPWVLAQARIT-HNHPLSHIGGRGMKACREEANRLVHQH----RDFHFEPY------KGQ---SSAYIVDTMQTVL-------------------- |
6 | 6grjG | 0.14 | 0.06 | 0.39 | 0.40 | MRFsearch | | --GGAFVTAIGAVADVVIGGVAVAGAGGITAGAIVLHNSLGARQDLYQKRSSLNSEVLIATQIGNGYKGLQVQAQNAVTAATQSNAWDSLTSDLGSLIT-------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 5tszA | 0.16 | 0.06 | 0.38 | 0.50 | FFAS-3D | | ---EVIGNELADNIANEIVSSLQKDSASFLQS-GFDVKTQLKATAKKVLVEALKAALEPTEKIVASTIEDAYFLLGPVVKTLFNKVEDVLHKPIPDTI-WE------------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 3jc8Na | 0.06 | 0.05 | 0.76 | 0.94 | SPARKS-K | | AVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMKVWVKT-FSENNNAVSAVSHDEVAEFMRGLNGVVWTPKGMGRLDSKTARVEMLTSDATIEEFPEAQVSPFFKNIDLQTAKQVGGAQVGVPILVEFKITMTSNY---------------------------------------------------------- |
9 | 2fgeA | 0.11 | 0.04 | 0.34 | 0.50 | CNFpred | | RFKQFVSQSRARMENRLRGSGHGIAAARMDAMLNIAGWMSEQMGGLEFLHTLEKKVDEDWEGISSSLEEIRRSLLARN--------------GCIVNMT-------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 3qmzA | 0.06 | 0.04 | 0.67 | 0.67 | DEthreader | | --------------------E-IHIPNFDTTLKLTIDSLKMIKSSLSTFLERQRRENILDTEIKLSVFTQFRDCLGQLKDIVVSKYIFQ--------------K-LLDKLN-------------IMSAIKGVSVALILVVFDSDSVVLFIVGAYLSPRELTRLGLIRLAPNQDLGNI------KTQPVNKELVFTEIQGYIDGLRALK------------------IGNCIIS--LKRL-LGK-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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