>PF03035 (251 residues) MASAFLAGLAGDVITNGVGSLINAGANAVNQKVEYDFNKQLQMASFKHDKEMLQSQVLAT KQLQQEMMNIRQGVLTAGGFSPADAARGAVNAPMTKILDWNGTRYWAPNSMKTTSYSGQF SSSPVHKSPAPSHAVSSKSRLQNDSVSVYSSPSSVSSQSTHSTVLSAGTGSSRSISTSTA TPTLSRTSDWVRGQNERLSPFMDGALQTAFVTPPSSKASSNGTVSTVPKAVLDSWTPMFN THRQPLFAHLR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MASAFLAGLAGDVITNGVGSLINAGANAVNQKVEYDFNKQLQMASFKHDKEMLQSQVLATKQLQQEMMNIRQGVLTAGGFSPADAARGAVNAPMTKILDWNGTRYWAPNSMKTTSYSGQFSSSPVHKSPAPSHAVSSKSRLQNDSVSVYSSPSSVSSQSTHSTVLSAGTGSSRSISTSTATPTLSRTSDWVRGQNERLSPFMDGALQTAFVTPPSSKASSNGTVSTVPKAVLDSWTPMFNTHRQPLFAHLR | |||||||||||||||||||
1 | 3pwxA | 0.08 | 0.04 | 0.55 | 0.59 | DisCoVER | YQSNIANLKT-TLSSQETHLD-SVSES-----------------L--SRDIVLWGAQDRS-GI----------------------------------TEL-YRDS---------IESS---------------------------FNAQDEEGHFLFSGTKTDTAALNKS---SGAYVVEGNSDVRVV-TV--AKGVT--D----SNTAQEILDI-----KNVLNQI-DALIAEFEFQVSLAIDTNVLAL- | |||||||||||||
2 | 1xmeA | 0.05 | 0.04 | 0.75 | 0.67 | DEthreader | --------LYLVLGFLALIVG-SLFGPFQALNYGNVDAYPLLKRLLPFVQS-YYQGLTLHGVLNAIVFTQLFAQAIMVYLAR---MRPNMGLMWL---------SWWMAFIGLVVALLFGAVVLTWIYVTMAIYMALA-VLMTAFTVA-------LPWDVAPGLGFGGGGIVGHFLQSL------MG-SLY-WLLPNLTG--------GLAVV------------LWFLGMMMAGIVLLV--LLFIYGL-- | |||||||||||||
3 | 1jp4A | 0.07 | 0.06 | 0.91 | 0.46 | CEthreader | ----------HNVLMRLVASAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFP------------KLTIIGEEDLPEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWVDPVDGTKEYTEGLLDNVTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAFGFQLKEAPAGKHIITTTRSHSNKLVTDCIAAMNPDNVLRVGIIQLIEGKASAYVFAS | |||||||||||||
4 | 3ugmA | 0.06 | 0.06 | 0.98 | 0.62 | EigenThreader | TPDQVVAIASKQALETVQRLLPVLCQAHKQALETVQRLLPVLCQIASNGGKQALETVQRLLPVLCQVQQLLPVLCQAHGLTPDQVVAIASNIGASNGGGHGLTIASNGGGKQALETVQRLLIASNIGGKQALETVQRLLPVLCQAHGLTPAQVVAIAS------HDGHGLTPDQVVAIASNGGGKQALETVQRLLPGLTQEQVVAIASNNGAHGLTPDQVVAIASNGGGKQALETVQRASNIGGKQALETV | |||||||||||||
5 | 2wodA | 0.13 | 0.09 | 0.69 | 0.37 | HHpred | ALGAFLGLAVGDALGAT---------------VEFMTKGEIAQGQITDDTEM--------------SLALGRSLAAKGTLDVADICE--------EFALWLKSRPVDVGNTCRGIMHEG----TTTAPSEGDAGNGAAMRCLP--AALATLGADLEPWVLAQARIT-HNHPLSHIGGRGMKACREEANRLVHQH----RDFHFEPY------KGQ---SSAYIVDTMQTVL-------------------- | |||||||||||||
6 | 6grjG | 0.14 | 0.06 | 0.39 | 0.40 | MRFsearch | --GGAFVTAIGAVADVVIGGVAVAGAGGITAGAIVLHNSLGARQDLYQKRSSLNSEVLIATQIGNGYKGLQVQAQNAVTAATQSNAWDSLTSDLGSLIT-------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5tszA | 0.16 | 0.06 | 0.38 | 0.50 | FFAS-3D | ---EVIGNELADNIANEIVSSLQKDSASFLQS-GFDVKTQLKATAKKVLVEALKAALEPTEKIVASTIEDAYFLLGPVVKTLFNKVEDVLHKPIPDTI-WE------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
8 | 3jc8Na | 0.06 | 0.05 | 0.76 | 0.94 | SPARKS-K | AVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMKVWVKT-FSENNNAVSAVSHDEVAEFMRGLNGVVWTPKGMGRLDSKTARVEMLTSDATIEEFPEAQVSPFFKNIDLQTAKQVGGAQVGVPILVEFKITMTSNY---------------------------------------------------------- | |||||||||||||
9 | 2fgeA | 0.11 | 0.04 | 0.34 | 0.50 | CNFpred | RFKQFVSQSRARMENRLRGSGHGIAAARMDAMLNIAGWMSEQMGGLEFLHTLEKKVDEDWEGISSSLEEIRRSLLARN--------------GCIVNMT-------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 3qmzA | 0.06 | 0.04 | 0.67 | 0.67 | DEthreader | --------------------E-IHIPNFDTTLKLTIDSLKMIKSSLSTFLERQRRENILDTEIKLSVFTQFRDCLGQLKDIVVSKYIFQ--------------K-LLDKLN-------------IMSAIKGVSVALILVVFDSDSVVLFIVGAYLSPRELTRLGLIRLAPNQDLGNI------KTQPVNKELVFTEIQGYIDGLRALK------------------IGNCIIS--LKRL-LGK-------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |