>PF03016 (285 residues) EKTLKVYVYKEGAKPIFHQPQVVLSGIYASEGWFMKHMKENKHFVTNNPKQAHLFYIPFS SRMLEEKLYVVGSGSRDNLVQHLKDYIHLIAERYDSWNRTGGSDHFLVACHDWATDETKK SMNSCIRALCNSDVKKEGFELGKDVSLPETYVRSPQNPLRELGGKPPSQRSFLAFFAGQM HGDVRRILLHYWENKDPDMKIFGKLKKSKNNRNYIQYMKSSKYCICAKGYEVNSPRVVEA IFHECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKKILVS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | EKTLKVYVYKEGAKPIFHQPQVVLSGIYASEGWFMKHMKENKHFVTNNPKQAHLFYIPFSSRMLEEKLYVVGSGSRDNLVQHLKDYIHLIAERYDSWNRTGGSDHFLVACHDWATDETKKSMNSCIRALCNSDVKKEGFELGKDVSLPETYVRSPQNPLRELGGKPPSQRSFLAFFAGQMHGDVRRILLHYWENKDPDMKIFGKLKKSKNNRNYIQYMKSSKYCICAKGYEVNSPRVVEAIFHECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKKILVS | |||||||||||||||||||
1 | 4rbnA | 0.06 | 0.05 | 0.87 | 1.00 | DEthreader | SAELAIMISRLL-ILSP---FGQDVVYILDQVRALEKEMHDRLQLQ-----------ILIV-TR-CRP-HWISRFEIWYSDGNLVATLLSRRLG-VT-------Q-CNI-AHALEKADLLAMNADFIVTSTYQEGGQYELFPFNIVSPGANADIYFPYSDPNR------DKPLIFTMARLDRINITGLVELYAAPLRANLVIVGLMRLDLAELYRYIADKRGIFVQPALFEAFGLTIIEAMASGLPTFATRYGGPLEI---IQNNRSGFHIDPNQGAATADLIAD | |||||||||||||
2 | 1rzuB | 0.09 | 0.08 | 0.88 | 1.00 | DEthreader | -------MNVL---SVS--IYPLIKGLADVVGALPIALEAHG--VR----------TRTLI-PGYVILDAPERPYNWKRFAALSLAAARIGAGPDMMR--PEIPSLLTIHNIAFQGFLKGGLQTAALSTVSY-IFGMGLEIGALHGIVNGIDDVWNPTDHLIHDNYLKRAGPLFCVISLTWIDLMAEAVDEIVSLG--GRLVVLGAAIGYNELSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVAR--TGGLAD--TVIDATGVQFSTDGLKQAIRRTVY | |||||||||||||
3 | 3vueA | 0.08 | 0.07 | 0.85 | 1.00 | DEthreader | ---HHMNVV-F---VGAEMAP-WSKTGLGDVLGPVIKVDRNNYFKTYGED----VVFVCNDWHT---------------G-PLASYLKNNYQIYRNA-------KVAFCIHNIQMKAGILEA-DR-VLTVSPYAELILTGI-TGIVNGMDVSEWDKDKYIAKYDAAIKARKPLIAFIGRLEPDVMAAAIPEL-MQEDVQIVLLGAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACAS-TGGL-VD--TVIEKTGFHMGLDKVAATLKRAKV | |||||||||||||
4 | 3vueA | 0.07 | 0.06 | 0.86 | 1.00 | DEthreader | ----H-HMNVV---FVG----MAPWSKGDVLGGLPPAMAAN-G-H-R---------VMVI--SPRYVRIDHPSFDNQMFSLLCQLLAYLKYQIYRNAK------VAFCIHNSYQGNWMKAGILADRVLTV--RGCELNIMRLTIGIVNGMDVEWDPSKDKYITAKYAIEAKIPLIAFILEGPDVMAAAIPELMQE-D-VQIVLLAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCAC-A--STGGLVD-TVIEKTGFHMGDKKVAATKRAIKV | |||||||||||||
5 | 1jg6A | 0.11 | 0.09 | 0.88 | 0.49 | HHpred | ---MKIAIINMGNNVINFK-----T-VPSSETILFKVISEGLNIISLKNGDYDRLIVNSSI-----NFFG-GKPNLAIL------------SAQKFMAKYKSKIYYLFTDRPWAYLYTELLIKSPIKVISQG-INLDAAHKVNVIFEYFPIEQYKIHM-NDFQLSKPTKKTLDVIYGGSFRSGRESKMVEFLFDTGLNIEFFGNAPGKIPMNMVSEKNSQAIAALII-GDNFITLRVWETMASDAVMLIDEETKHRIIND-----ARFYVNNRAELIDRVNELKH | |||||||||||||
6 | 4w6qA | 0.08 | 0.06 | 0.82 | 0.59 | DisCoVER | -ACMRTYIT------NLNGH-SITSTAQIAQNMVTDIAVSLGFRELGGLRKNDIVIFQTPTWN---------------TTTFDEKLF-------KLKIFG--VKIVIFIHDVVLMDRTIAYYNADVLIAPSQAMVLYGLTVKKILVQGMWDHPTN-ITL--Q---AVN-HKKLVHFPGNPRFNFIKNW--RI--PT-ELHVYTDHVVKEPYQEQIMKMSEGGYGLVWMDDLYCPYKLGAYIAAGIPVIIQKGIANQIIEK-N-N--LGFIIEK--IDDISNIVE- | |||||||||||||
7 | 4pqgA | 0.17 | 0.13 | 0.79 | 0.28 | MRFsearch | ---EEVYHFKD----------KIFYGKQAFVRAFMKSLNLN---------KSDLVILDRETGIGQVVFEENATNEDYILWNNYYDYQFTNADK---------VDFFIVS-----TDRQNEVLQEQFAKYT--------QHQPKIVTIPVG-------SIDSLTDSSQGRKPFSLITASRLAGGEDSLLREIIANHEDYIQLKG-------HAELSQIYSQYEVYLTASTSEGFGLTLMEAIGSG-LPLIGFDV-PYGNQTFIEDGQNGYLIPSSYAAKICQLYQE | |||||||||||||
8 | 6kihA | 0.10 | 0.10 | 0.94 | 0.81 | SPARKS-K | --RQPIALISVHGDPAADVGHESAGGQNIYVRQLGEALAAA-GWH--------VDMFTRKTDPNDPDAGPLTYIPREKLFETLPKFVEAFKAYHAQLRQQFNF-QWLHTYHSLGVETRLMVEKAILEVIVTSVSKAGQTRLIPCG-TNLKLFYPVADARAQLN--LPADEPIVLYVGRFDRRKGIETLVAAMAQPQGQLLLVGGSDPQRDHEYLAVYYSAANVCVVPSYYEPFGLVAIEAMACGT-PVIASAVG--GLQFTVIPEETGLLVPPQDANALANAIQR | |||||||||||||
9 | 1rzuB | 0.08 | 0.07 | 0.88 | 0.95 | MAPalign | ---MNVLSVS-----SEIYPLIKTGGLADVVGALPIALEAVRTRTLIIGARPDMVHAHD-W------------------Q-AAM-TPVYMRYAETPE-----IPSLLTIHNIQGQSFLKGGLQTAALSTVSPILGMGLIGAHVLHGIVNGIDADVWNPATIHDNYSALNKAVLFCVISRLWQKGIDLMAEAIVSLGGRLVVLGAGDIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLATVIDLASKAATGVQFSVDGLKQAIRRTV- | |||||||||||||
10 | 6d9tA | 0.10 | 0.10 | 0.94 | 0.70 | CEthreader | QGHMKIGITCYPSMGGSG------IIATELGIKLAERGHEVHFITSNIPFRIRKPLPNMIFHQVEVNQYAVFQYP--PYDITLSTKIAEVIKEYDL-------DLLHMHYAVPHAICGILAREMSIKIMTTLGAIKFGIEKSDIVTSEIIPIYNFVRENEFPTKHNTALKEKVLIHVSNFRQVKRIDTIIETFKIPSKLILLGDGPELVKQDCVSEFYQLSDLVLLLSEKESFGLTLLEAMKTGV-VPIGSNAGGIK--EVIKHGETGFVVDVGDCDSASDYAIR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |