>PF02992 (211 residues) DGKLRHPVDYVTWDHMNAKYPTFADEARNLRLGLSTDGFNPFNMKNSMYSCWPVLLVNYN LPPDLCMKKENIMLSLLIPAPHQPGNSIDVYLEPLIDDLNTLWSIGEVTYDALTRSAFTL KAMLLWTISDFPAYGNLAGCKVKGKMGCPLCGKNTESMWLKFSRKHVYMGHRKGLPPTHS FRGKKKWFDGKVEQGRRGRILTGRDISQNLR |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | DGKLRHPVDYVTWDHMNAKYPTFADEARNLRLGLSTDGFNPFNMKNSMYSCWPVLLVNYNLPPDLCMKKENIMLSLLIPAPHQPGNSIDVYLEPLIDDLNTLWSIGEVTYDALTRSAFTLKAMLLWTISDFPAYGNLAGCKVKGKMGCPLCGKNTESMWLKFSRKHVYMGHRKGLPPTHSFRGKKKWFDGKVEQGRRGRILTGRDISQNLR | |||||||||||||||||||
1 | 6b40A | 0.10 | 0.07 | 0.71 | 1.02 | MRFsearch | ----------EIVNGLKKLGRDPNDPTLVIHTICKDG---------LRFSFCVLRCSVMHKPNSVR----SNRPVLECIGDENDDGTVAVCVGPIECQRLLMKDKIMRVHMS-DGTQRAHYLTFFNSMVDEKWDRAHGGLAGGSKYLCTLCEAVRDEALEK-------------------------------------ITRTLKKIEVTAS | |||||||||||||
2 | 4wwxB | 0.10 | 0.10 | 0.97 | 1.03 | MAPalign | --VSALMDMEEDILEGMRSQDLDDNGPFTVVVKESCDGMGDVSEKVP-EKAVRFSFTVMRIEEPKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKSSELTLEM--GGIPRTFKFIFRGTGYDEKLVREVEGLEASGSVYITLCDTTRLYWLRDRVKGVSAKPVCELIPSEERHKPVWRSSCPAKECPESLCQYSFNSQRFAE- | |||||||||||||
3 | 4wwxB | 0.13 | 0.13 | 0.99 | 1.08 | CEthreader | VSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKESCDGMGDVSEKVPEKAVRFSFTVMRITIEHKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKSSELTLEMG--GIPRTFKFIFRGTGYDEKLVREVEGLEASGVYICTLCDTTRLEASQNLVFHSITRSHAENLQRYEVWRSNKGVSAKPFIETVPSIDALHCDIGNAAE | |||||||||||||
4 | 6b40A | 0.08 | 0.08 | 0.96 | 1.09 | HHsearch | PDFCPNTYAHAVAKTLEDEINGLKTLVIHTICKDGADGMGDHKEKSDPDKALRFSFCVLRCSVMHPNSVRSNRPVLECIGDENDDGTVAVCVGPIECQRLLMKDKIMRV--HMSDGQRAHYLTFFNSMVDEKWDRAHGGLAGASKYLCTLCEAVRDEAL----EKAGSYKI---TRTLESQEKDTFGVKGYPLLTTEPWERGIVDAESKLD | |||||||||||||
5 | 4wwxB | 0.15 | 0.11 | 0.75 | 1.00 | DEthreader | -------------------------GPFTVVVKESCDGMGDVSEKVP-EKAVRFSFTVMRFEEPKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKSSELTLEM--GGIPRTFKFIFRGTGYDEKLVREVEGLEASGSYICTLCDTTRLSEKAKRKQM---------F--QRAELLSTKFKRYEGK------AHEI-------- | |||||||||||||
6 | 4wwxB | 0.14 | 0.10 | 0.72 | 1.00 | DEthreader | ------------------------NGPFTVVVKESCDGMGDVSEKVP-EKAVRFSFTVMRIEEPKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKSSELTLEM--GGIPRTFKFIFRGTGYDEKLVREVEGLEASGSVYITLCDT-TR------------LEA----------------SQ--NLVF-HSITRENQRYVLRDR | |||||||||||||
7 | 4wwxB | 0.15 | 0.13 | 0.86 | 0.53 | HHpred | --------EEDILEGMRSQLDDYLNGPFTVVVKESCDGMGDVSEKVVRFSFTVMRITIEH---G----SQNVKPLCLMLADESDHETLTAILSPLIAEREAMKSS-ELTL-EMGGIPRTFKFIFRGTGYDEKLVREVEGLEASSVYICTLCDTTRLEAS----QNLVF--H-------SITRSHAENLQRYEVWRSNPYHESVEELRDRVK | |||||||||||||
8 | 1ycdB | 0.10 | 0.07 | 0.68 | 0.84 | DisCoVER | ----------------------------QIPKLLFLHGF---------LQNGKVFSRNVQ-----------CDYI-DAPVLLTLDADV--NR------------AWFYHSISHELDISEGLGPYDGIVGLSQGAALSSIITNQFKVSVVISGYS---FTEPTEKFKTKMIFIYGASDQAVPSRSKYLYVLAYEHPGGHMVPIVEQITSSL- | |||||||||||||
9 | 4wwxB | 0.12 | 0.10 | 0.83 | 0.78 | MRFsearch | ----------DILEGMRSQLDDYLNGPFTVVVKESCDGMGDVSEKAVRFSFTVMRITIEHG----------SQNVKVFEEPKPDHETLTAILSPLIAEREAMKSSELTLEMG--GIPRTFKFIFRGTGYDEKLVREVEGLEAGSVYICTLCDTTRLEASQ----NLVFH---------SITRSHAENLQRYEVWRSNPYHESVEELRDRVK | |||||||||||||
10 | 4wwxB | 0.15 | 0.13 | 0.90 | 0.91 | SPARKS-K | VSALMDM-EEDILEGMRSQLDDYLNGPFTVVVKESCDGMDVSEKVPEKAVRFSFTVMRITIEEPKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKS-SELTLEMG-GIPRTFKFIFRGTGYDEKLVREVEGLEASGVYICTLCD-----------------TTRLNLVF-HSIRSHAENLQRYEVWRSNPYHESVEELRDRVK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |