Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MSDITKIKQEFDKKVAEIKALMKNPQQDSGLLSNSIDFRDQNLIFSNSGGVCTSSKDKIENYPAKGYPYKRGVKLSFGDGTTEVEVEAGGGDDLYGVCSDIDEFSGMATVIPITNNFTGYLTLKKEGQNGVNPGDKLNFNQHGELEKVTGAQKSVNAIALSKAHKLTEDLFIVLASVFGNRALK |
1 | 5wk1X | 0.15 | 0.10 | 0.70 | 1.03 | DisCoVER | | -------------K---N------------SI-----F-VGGAGR-----VKQTIEGLAQSAFK----PGQLLARA--AGDAIDVTAKSGNEFLICDDQGTDVVTAGDTVQAISVGQYVLLSFAATQ--NVTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVT-TAGTLVLCRA------- |
2 | 6qyyA | 0.13 | 0.07 | 0.55 | 1.08 | MRFsearch | | ---------------------------------------------------------------------MAYRLLAYSQGDDIIEISHAANTIPDYVAVKDVDKGDLTQVNMY--PLAAWQVIAG---SDIKVGDNLTTGKDGTAVPTDD-PSTVFGYAVEEAQ----EGQLVTLVISRSK--- |
3 | 4j5tA1 | 0.06 | 0.04 | 0.73 | 0.83 | DEthreader | | EQKFTNESLLW--APYRS-NCYF-------WFNSLSGLHSLRHFATPDKL------------PGGKEVFILLTVYFVKSKNGNWSVRVQGEP-ASVVLY-F-------------------SQNGGEIDKSSL--AMIGHDGPNDMKFFG-EYHLTVKTHLSLIPDKE---ANFHYIQKTFQFDR |
4 | 6qyyA | 0.13 | 0.08 | 0.65 | 0.95 | CEthreader | | ------------------------------------------------------MMVSFTARAKSNVMAYRLLAYSQGDDI-IEISHAAENTIPDYVAVKDVDKGDLTQVNM-YPLAAWQVIAG----SDIKVGDNLTTGKDGTAVPTDDPS-TVFGYAVEEAQ----EGQLVTLVISRSKLEH |
5 | 2wd6A | 0.08 | 0.07 | 0.93 | 0.72 | EigenThreader | | YKKEFAAYTAALAEAESK---KYGQQELDALVKSWGISPTNPD-----RKKSRAYSYFNAINSNNTYAKLVLEKDVTYLKNSVYTYTLKNDGTKMTMFASS--DPTVTAWYNDYFTSTNINVFYDEEGQLMLTGGLVNFS-SLNRGNGSGIDKDAIESVRNFNGEITQS-EISFNMASSKSGNI |
6 | 6qyyA | 0.16 | 0.09 | 0.59 | 0.32 | HHpred | | ----------------------------------------------------------MVSFTKSNVMAYRLLAYSQG--DDIIEISAAENTIPDYVAVK-DVDKDLTQVN-MYPLAA-WQVIAGSD---IKVGDNLTTGKDGTAVPTDDP-STVFGYAVEEAQ--EGQLVTLVISR------- |
7 | 5wk1X | 0.18 | 0.10 | 0.57 | 0.70 | MRFsearch | | -----------------------------------------------------------------------GQLLARAAG-DAIDVTAKAYGNEFLICDDQPQTGDTVQAISVLPGQYVLLSFAA-TQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTT-AGTLVLCRAI------ |
8 | 2j5uA | 0.16 | 0.14 | 0.89 | 0.49 | FFAS-3D | | -QHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNAS---VISRNPTNWND------------QVEIDKGKPDMAVTTPSG--LIGKVTTT--GAKSATVELLTSNAFGIINGYDSDDMKFKKGQKVVTSGLGTIEKVTDKMGLSQTAFIKPGADMYDLNHVTVLKRSAEAGTT |
9 | 1i5pA3 | 0.09 | 0.07 | 0.78 | 0.69 | SPARKS-K | | ---------------------------------HLAPEDYTGFTISPIHATQVNNQTRTFISEKFG---NQGDSLRFEQSNTTARYTLRGNGNSYNLYLRVSS-IGNSTIRVTINYTVSNVNTTTNNDGVNDNGARFSDINIGNIVASDNTNVTLDINVTLNS---GTPFDLMNIMFVPTNLPP |
10 | 3li5A | 0.09 | 0.05 | 0.53 | 0.69 | CNFpred | | -----------------------------------------------------------------------GSIYCFTT-DGQMIQVDTAFQFPDGIAVRHMNDRPYQLIVAETPTKKLWSYDIKG-------PAKIEN--KKVWGHIPGHEGGANGMDFDE-----DNNLLVANWGSSHIEVF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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