Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GLSSRLSNRLCFSARCANITPETHTVSVSSTTGFRTFATAPTLFVMKEVKSTYLYIQEHLLVFMTLVALIGTMCGILGTIIFAHCQKQRDSNKTVPQQLQDYYSLHDLCTEDYTQPVDWY |
1 | 4ke2A | 0.07 | 0.07 | 0.90 | 1.17 | DEthreader | | -TAAAASAAAAAVASA-A--------ALETI-AY-AATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAAAAAAFAAP |
2 | 6agfB | 0.05 | 0.04 | 0.84 | 0.61 | DisCoVER | | DSETEAVYGFKILCTFTEWTFEFVKILRYENEVLQLEEDEGRVVWNGSRGT---KD-LQ-DLS-IFITNVYNHSGDYECHV--YRLLFFENYEHNT-SVVKKIHI--EV-------VDK- |
3 | 2pywA | 0.08 | 0.07 | 0.85 | 0.83 | DEthreader | | TFIHGDLHDIGAYLLILRTEQTWNL----------FNK------RFILWKAYYLKFVQENYMRNLLHDSLGFGAAKMIRRIHVDFESIEEDKRRAICERSALEFAKMLLK--ERKFVVIQ |
4 | 5vhxE | 0.09 | 0.09 | 1.00 | 0.51 | CEthreader | | VALNLLALLFATTACQGTQRVPFQLRRFHTGIWYSCEEGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELLHSSDGLKLNAFLLGMVAHMMYTQVFQVTVSLGPEDWR |
5 | 2xqhA | 0.08 | 0.08 | 0.99 | 0.52 | EigenThreader | | GARATEKASTAVGAAADGKQSTVGTYAYA-NASTALGSVAGTAAGNRALGAKAVALGANSVTQLNRKVGGVYDDVKARITVESEKQKKYTDQKTSEVNEKVEARTTVGVDSDGKAEGATK |
6 | 5kxiB | 0.11 | 0.06 | 0.54 | 0.28 | HHpred | | ------------------------------------------------ISKIVPPLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMAPWVKVVF-LEKLPSEDWK------ |
7 | 5xsyB | 0.14 | 0.06 | 0.41 | 0.30 | MRFsearch | | ----------------------------------------NKTITLNVVPKATRGTASILSEVMMYVSIIGLQLWLLVEMVYCYRKIAA------------------------------- |
8 | 2ip6A | 0.19 | 0.09 | 0.49 | 0.38 | FFAS-3D | | --------------------------------------------------------QQALDLFTRLQFLLQKPYQYVLDILETGISKTKHNQQTPERQARVYNKIASQALVDKLH----- |
9 | 5a1uE7 | 0.10 | 0.09 | 0.95 | 0.74 | SPARKS-K | | ---DSTMLQAVERYMKQAIVDKVPSVSSSAVSSLHLLKCSFDVVAQEAASSDNIMVQYH---ALGLLYHVRKNDRLAVSKMISKFTRHGLKSPFAYCMMIRVASLEEEDGSRDSPLFDFI |
10 | 5amrA | 0.13 | 0.09 | 0.72 | 0.53 | CNFpred | | --------TVVYSIIVLHK-EEENIFNPGC--LHGTFKCNGYISISRAIRLCQRIVSSPGLFLTTCLLFKLVMSDIMNFSIYTSLS------------TKSVLSLTEPA----------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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